Query= MSMg01no361_a06.b1 MSMg01no361_a06.b1 CHROMAT_FILE:
MSMg01no361_a06.b1 PHD_FILE: MSMg01no361_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:55 2005
(567 letters)
>mm_chr18_37798723_37799689
Length = 967
Score = 1054 bits (545), Expect = 0.0
Identities = 561/571 (98%), Gaps = 8/571 (1%)
Strand = Plus / Plus
Query: 5 gaattccaggatagccagggctatacagagaaaccccgtatcgaaaaact--------aa 56
|||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 197 gaattccaggatagccagggctatacagagaaaccccgtatcgaaaaactaaaaaaaaaa 256
Query: 57 aaaaaaaaagaataatagagaagacaaactacttggaaactactacatttaagtccgtgg 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aaaaaaaaagaataatagagaagacaaactacttggaaactactacatttaagtccgtgg 316
Query: 117 caagaaacaaaacatcccacagcagctgctcttctctgggacaggcaaggcaaagctcgg 176
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 317 caagaaacaaaacatcccacagcagctgctcttctctgggacaggcaaggcagagctcgg 376
Query: 177 actcccgccttacagaggaccccagatttgggatcagtgtttctttcattagctttcatg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 actcccgccttacagaggaccccagatttgggatcagtgtttctttcattagctttcatg 436
Query: 237 aactatatttaaaaggttttagcctggtggagtggcacacacctttaatccgaagcaggt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aactatatttaaaaggttttagcctggtggagtggcacacacctttaatccgaagcaggt 496
Query: 297 gtgagcagatttctcaattcaaggccagcctgatctacagggacaatcccaaaagggcta 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gtgagcagatttctcaattcaaggccagcctgatctacagggacaatcccaaaagggcta 556
Query: 357 cagaccctttctcaaaaacaaaacagtaaggtattaaaactcagattgtacatggtaaga 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cagaccctttctcaaaaacaaaacagtaaggtattaaaactcagattgtacatggtaaga 616
Query: 417 ggtagaatttttcagcagatggcctttcctttggaaaatgtccaactgttgacatttgaa 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggtagaatttttcagcagatggcctttcctttggaaaatgtccaactgttgacatttgaa 676
Query: 477 ttttctctgagataacttttctttagagataatattctaagatttttaaaaagattttac 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ttttctctgagataacttttctttagagataatattctaagatttttaaaaagattttac 736
Query: 537 taatttgcaattatgtgcaccatggagatca 567
||||||||||||||||||| |||||||||||
Sbjct: 737 taatttgcaattatgtgcagcatggagatca 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_a06.g1 MSMg01no361_a06.g1 CHROMAT_FILE:
MSMg01no361_a06.g1 PHD_FILE: MSMg01no361_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:55 2005
(462 letters)
>mm_chr18_37981392_37982253
Length = 862
Score = 886 bits (458), Expect = 0.0
Identities = 461/462 (99%)
Strand = Plus / Minus
Query: 1 accagcagcgatgcggggcgccaccccttcgacatgcgggttaggagttgcgtctacctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 accagcagcgatgcggggcgccaccccttcgacatgcgggttaggagttgcgtctacctc 603
Query: 61 cccttgcccataaacacccctcccccacgctcagaaccctgtctttgcttcagccactct 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 602 cccttgcccataaacacccctcccccacgctcagaaccctgtctttgcctcagccactct 543
Query: 121 gattgtccactttcaaacgcatccaacaggtgtgccagcttggtacaaagagaaagagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gattgtccactttcaaacgcatccaacaggtgtgccagcttggtacaaagagaaagagag 483
Query: 181 tgcaagagcaaaccccccttaggtggaccgggcagcttctccatcgcgccctcccggggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgcaagagcaaaccccccttaggtggaccgggcagcttctccatcgcgccctcccggggg 423
Query: 241 tcgcatggcggctcccagccctcacctggctccgctcccgcagcgtactagagcgggaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcgcatggcggctcccagccctcacctggctccgctcccgcagcgtactagagcgggaac 363
Query: 301 gcaaggcctcgggttccagcgccaaggctgagggctgctgaacgctgaggggcctgagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcaaggcctcgggttccagcgccaaggctgagggctgctgaacgctgaggggcctgagga 303
Query: 361 aagtgaagtcactgccatccgaggccggagaaaagcaggtcctgtagcaatggctctgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aagtgaagtcactgccatccgaggccggagaaaagcaggtcctgtagcaatggctctgag 243
Query: 421 agtccgtgggccgcagggtcacctccatgtactttagtgtgc 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agtccgtgggccgcagggtcacctccatgtactttagtgtgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
