Query= MSMg01no363_c08.b1 MSMg01no363_c08.b1 CHROMAT_FILE:
MSMg01no363_c08.b1 PHD_FILE: MSMg01no363_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:46 2005
(505 letters)
>mm_chr18_39705625_39706530
Length = 906
Score = 862 bits (446), Expect = 0.0
Identities = 488/502 (97%), Gaps = 1/502 (0%)
Strand = Plus / Plus
Query: 5 gaattcacccttgtgtccagggactcaagggttgtcctttgattctttcttctcctctct 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacccttgtgagcagggactcaagggttgtcctttgattctttcttctcctctct 264
Query: 65 gctctgtcttagcatctcttcccagatagtcctggtttctatgattctagccttcagcct 124
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 265 gccctgtcttagcatctcttcccagatagtcctggcttctatgattctagccttcagcct 324
Query: 125 aaatctcagctctaatcaggttgattttctgctgagcaattttaattgctcattatcttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaatctcagctctaatcaggttgattttctgctgagcaattttaattgctcattatcttc 384
Query: 185 agagtcaaatccaaaaccctaggaaagctttggggtcacaccattgtcaggtcatagatg 244
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 385 agagtcaaatccaaaaccctaggaaagttttggggtcacacaattgtcaggtcatagatg 444
Query: 245 atatacactgatttcatgtgatggatgattcaaatatttaaataaaatttagtaaactaa 304
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atatatactgatttcatatgatggatgattcaaatatttaaataaaatttagtaaactaa 504
Query: 305 aaacttagaaacaaaaaaa-gtatttgaataaaaatatttaggtccagagaagagcccat 363
||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||
Sbjct: 505 aaacttagaaacaaaaaaaagtatttgaataaaaatatttaggttcagagaggagcccat 564
Query: 364 actgttcctgcagcggtcaagggttcaggtcagaacatacacattgtgtggctcataacc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 actgttcctgcagcggtcaagggttcaggtcagaacatacacattgtgtggctcataacc 624
Query: 424 ccctctaagtccaggggatatgatgctgccttccgtactctgaggacatctgccctcatc 483
|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |
Sbjct: 625 ccctctaagtccaggggatatgatgctgccttccatactctggggacatctgccctcacc 684
Query: 484 catacccacacccatatacaca 505
||||||||||||||||||||||
Sbjct: 685 catacccacacccatatacaca 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 906
Length adjustment: 10
Effective length of query: 495
Effective length of database: 896
Effective search space: 443520
Effective search space used: 443520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_c08.g1 MSMg01no363_c08.g1 CHROMAT_FILE:
MSMg01no363_c08.g1 PHD_FILE: MSMg01no363_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:46 2005
(593 letters)
>mm_chr18_39892156_39893148
Length = 993
Score = 1098 bits (568), Expect = 0.0
Identities = 585/591 (98%)
Strand = Plus / Minus
Query: 3 tttttttatatgtagatcgctgaggaaagcctaaactaacggtgaaaaatatactgcaag 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tttttttatatgtagatcgctgaggaaagcctaaactaacggtgaaaaatatactgcaag 691
Query: 63 aaatacatgaagctgatgtagccacttattagcattaccaagtattatgcgaagaaggta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aaatacatgaagctgatgtagccacttattagcattaccaagtattatgcgaagaaggta 631
Query: 123 attgtgtatgttgctattttataaaaccagaaataccaaaagccggtctataagcacatc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 attgtgtatgttgctattttataaaaccagaaataccaaaagccggtctataagcacatc 571
Query: 183 accacatgcatagaacaatgccatgtgatacgacatgatgacacatgtgatgtcacaggt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 accacatgcatagaacaatgccatgtgatacgacatgatgacacatgtgatgtcacaggt 511
Query: 243 ggtaagggtttagcttcatcgcaatttcatgggaccaccatgggtagcaacttcaagcag 302
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gggaagggtttagcttcatcgcaatttcatgggaccaccatgggtagcaacttcaagcag 451
Query: 303 aacttagactttctcatcattcttggccttggaatggggacgttaatgctggccttgcag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aacttagactttctcatcattcttggccttggaatggggacgttaatgctggccttgcag 391
Query: 363 aggggggacaggggatatgaatgagctagtgtgtatacattgtttaccatgatgcctgga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aggggggacaggggatatgaatgagctagtgtgtatacattgtttaccatgatgcctgga 331
Query: 423 ctgctataaacagccatggaaaggagtcttgcaaatggtttaccagtaagtaccatcctt 482
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 330 ctgctataaacagccgtggaaaggagccttgcaaatggtttaccagtaagtaccatcctt 271
Query: 483 tctggtcctttcctgggtactcattaacttcatcctatacaatctcttaaggtgccatct 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tctggtcctttcctgggtactcattaacttcatcctatacaatctcttaaggtgccatct 211
Query: 543 atccttggctcgntctctctctctctctctctctccctctccctctctctc 593
|||||||||||| |||||||||||||||||||||| ||||| |||||||||
Sbjct: 210 atccttggctcgttctctctctctctctctctctctctctctctctctctc 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
