Query= MSMg01no363_g24.b1 MSMg01no363_g24.b1 CHROMAT_FILE:
MSMg01no363_g24.b1 PHD_FILE: MSMg01no363_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:09 2005
(553 letters)
>mm_chr18_28838001_28838953
Length = 953
Score = 1007 bits (521), Expect = 0.0
Identities = 542/549 (98%), Gaps = 1/549 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcatttatcttctttgttctcttccataagtgcatggtagcatggaagatcgg 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 205 gaattcttcatttatcttctttgttctcttccataagtgcatggtagcatggaaaatcgg 264
Query: 65 agggaatctcaggtctaacatctgacttttctataatatgagaaatacttaacttttttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agggaatctcaggtctaacatctgacttttctataatatgagaaatacttaacttttttg 324
Query: 125 gttctttttcctagtctgtgaaatagtttattccaggaaagctttttcacttgaaagact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttctttttcctagtctgtgaaatagtttattccaggaaagctttttcacttgaaagact 384
Query: 185 atgactttgacaaagactatgacagtggtgccatcactgctactaacgcagcttttccaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgactttgacaaagactatgacagtggtgccatcactgctactaacgcagcttttccaa 444
Query: 245 tcccttgaaatatttcctgtctcacaaactaacagtgtacggtgggctcctttttagtta 304
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 445 tcccttgaaatattttctgtctcacaaactaacagtgtacgttgggctcctttttagtta 504
Query: 305 aggctgtgtgttatgtagatggaacgaggagatgcccagatagctggtaaaacctttctg 364
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 505 aggctgtgtgttatgtagatggaactaggagatgcccagatagctggtaaaacctttctg 564
Query: 365 tatatgtccataagagtgtaagaaagataggattttgaattaattaggtttacttttaac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatatgtccataagagtgtaagaaagataggattttgaattaattaggtttacttttaac 624
Query: 425 caatttggatgagagtcgcatagcttatcaactaaggccaaaacagagataaaggaaatg 484
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caatttggatgagagtcacatagcttatcaactaaggccaaaacagagataaaggaaatg 684
Query: 485 aagtctctcttgagttgcctctgttccttcttttccttctccatccttcttccatcttta 544
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 685 aagtctctct-gagttgcctctgttccttcttttccttttccatccttcttccatcttta 743
Query: 545 cctcctttt 553
|||||||||
Sbjct: 744 cctcctttt 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_g24.g1 MSMg01no363_g24.g1 CHROMAT_FILE:
MSMg01no363_g24.g1 PHD_FILE: MSMg01no363_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:09 2005
(572 letters)
>mm_chr18_29025916_29026887
Length = 972
Score = 1091 bits (564), Expect = 0.0
Identities = 570/572 (99%)
Strand = Plus / Minus
Query: 1 cactaaagcattaaaccaaagttgccccatattttgaccattggactgatttcttttaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 cactaaagcattaaaccaaagttgccccatattttgaccattggactgatttcttttaac 713
Query: 61 ataaccatagaattttaaaatataataatgtgattattattctacatcttctagaaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ataaccatagaattttaaaatataataatgtgattattattctacatcttctagaaagac 653
Query: 121 agagtgagtgagagtgaggagagagcttgatttatgcattgtttatgagagcttaataac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agagtgagtgagagtgaggagagagcttgatttatgcattgtttatgagagcttaataac 593
Query: 181 tgatattctttgattcaaacataaaagttttattaatgtagcctttgtattggaattgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tgatattctttgattcaaacataaaagttttattaatgtagcctttgtattggaattgca 533
Query: 241 gttttatattcacatattaaagctgctttttgacataggtcaattaatgacaaagccaaa 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gttttaaattcacatattaaagctgctttttgacataggtcaattaatgacaaagccaaa 473
Query: 301 tgtaacactttattcctaatcccaactaaagtaatgacctagacactaaataaacctctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tgtaacactttattcctaatcccaactaaagtaatgacctagacactaaataaacctctg 413
Query: 361 gtctctgacttttgtaatgcaataatgatgcagaattatgtggttcatgtgcaagattca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gtctctgacttttgtaatgcaataatgatgcagaattatgtggttcatgtgcaagattca 353
Query: 421 aaccaaaatacactcatgtacaaaagcagcccaatataaaaccccgcatgtttctctcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aaccaaaatacactcatgtacaaaagcagcccaatataaaaccccgcatgtttctctcag 293
Query: 481 ttgtcaactatctaacattcaagcatgtttttattatttttcatcacctatctaccaatt 540
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 292 ttgtcaactatctaacattcaagcatgtttttatcatttttcatcacctatctaccaatt 233
Query: 541 atctctatattatctatcaggtatctatctac 572
||||||||||||||||||||||||||||||||
Sbjct: 232 atctctatattatctatcaggtatctatctac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
