Query= MSMg01no364_e01.b1 MSMg01no364_e01.b1 CHROMAT_FILE:
MSMg01no364_e01.b1 PHD_FILE: MSMg01no364_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:18 2005
(463 letters)
>mm_chr18_33400269_33401132
Length = 864
Score = 820 bits (424), Expect = 0.0
Identities = 451/460 (98%), Gaps = 3/460 (0%)
Strand = Plus / Plus
Query: 5 gaattctgcacttattccgcaattctggaacttacctactgattatgcagagtggaga-t 63
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattctgcacttattctgcaattctggaacttacctactgattatgcagagtggagact 264
Query: 64 ctgggattgcagaaacaagatctctgatgtgtttgcaacattaagtgctaacttaacaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgggattgcagaaacaagatctctgatgtgtttgcaacattaagtgctaacttaacaaa 324
Query: 124 catgatacttggtgtgatggttaatcttgattgtcaactggacatactttggaggagaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catgatacttggtgtgatggttaatcttgattgtcaactggacatactttggaggagaaa 384
Query: 184 tcctcatttgaagaaatgccttcatcagattcatctgtaaagcaaattaactggtttaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcctcatttgaagaaatgccttcatcagattcatctgtaaagcaaattaactggtttaca 444
Query: 244 tgtcaatgactaggtaggatggaaagttaccagtccatgtagagttataaattaatctgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtcaatgactaggtaggatggaaagttaccagtccatgtagagttataaattaatctgg 504
Query: 304 gtatctttagccccacaaataaccattccttgccagcctctatgtcacacttaacagact 363
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 505 gtatctttagccccacaaataaccattccttgccagcctctgtatcacacttaacagact 564
Query: 364 gtgactaatagaaaaaaaaatcatttagattctattaacttaaaaaaaa-cccagagccc 422
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 565 gtgactaatagaaaaaaaa-tcatttagattctattaacttaaaaaaaaacccagagccc 623
Query: 423 cgggtcaccttgggtgcagagtcagcagacactcccaagg 462
|||||||||||||||||||||| |||||||| |||||||
Sbjct: 624 cgggtcaccttgggtgcagagttggcagacacccccaagg 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 864
Length adjustment: 10
Effective length of query: 453
Effective length of database: 854
Effective search space: 386862
Effective search space used: 386862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_e01.g1 MSMg01no364_e01.g1 CHROMAT_FILE:
MSMg01no364_e01.g1 PHD_FILE: MSMg01no364_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:18 2005
(506 letters)
>mm_chr18_33573730_33574635
Length = 906
Score = 978 bits (506), Expect = 0.0
Identities = 506/506 (100%)
Strand = Plus / Minus
Query: 1 aacactttcatatatcttgaaatgcgctttcaattttaatatattttatttccctctaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 aacactttcatatatcttgaaatgcgctttcaattttaatatattttatttccctctaga 647
Query: 61 gtaatttgattgcttgactggcaaaccttccaaagtaattcacatggacctaacaaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gtaatttgattgcttgactggcaaaccttccaaagtaattcacatggacctaacaaataa 587
Query: 121 agcatataaatatttggacccctgtgtttgttgagtgttataatacggtatataaagtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 agcatataaatatttggacccctgtgtttgttgagtgttataatacggtatataaagtta 527
Query: 181 ataaaaattgcattgtaaagtgtaaatatgaattaattccttgattagatattttaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ataaaaattgcattgtaaagtgtaaatatgaattaattccttgattagatattttaaatt 467
Query: 241 gacattgaactataattataatataaatagatgtaactataattataagtaaataaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gacattgaactataattataatataaatagatgtaactataattataagtaaataaaaca 407
Query: 301 ttggctactgggttcttttaatttgaaaaatactaatattattagcttctaactttctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ttggctactgggttcttttaatttgaaaaatactaatattattagcttctaactttctaa 347
Query: 361 attatttgtcctcttttttcaattctgaaattgagaggtactttacccttttagcagtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 attatttgtcctcttttttcaattctgaaattgagaggtactttacccttttagcagtca 287
Query: 421 agtcccatcccagttagtccaggctcttgtggacaacatctcagcctgaacctgagggtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agtcccatcccagttagtccaggctcttgtggacaacatctcagcctgaacctgagggtc 227
Query: 481 tgtagtcaccttattctttcttttaa 506
||||||||||||||||||||||||||
Sbjct: 226 tgtagtcaccttattctttcttttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
