Query= MSMg01no364_e13.b1 MSMg01no364_e13.b1 CHROMAT_FILE:
MSMg01no364_e13.b1 PHD_FILE: MSMg01no364_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:20 2005
(401 letters)
>mm_chr18_79304522_79305321
Length = 800
Score = 750 bits (388), Expect = 0.0
Identities = 394/396 (99%), Gaps = 1/396 (0%)
Strand = Plus / Minus
Query: 6 ggaattcccttaaatgcacagaatgcccctttgaaagcacgcattgtgtgcgtttgtaca 65
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ggaattcccttaaatgcatagaatgcccctttgaaagcacgcattgtgtgcgtttgtaca 541
Query: 66 ggagcagagggcttgggaattaacggcaggcttccctttcggtggtttccagtgggaaat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ggagcagagggcttgggaattaacggcaggcttccctttcggtggtttccagtgggaaat 481
Query: 126 cactccggaaaggaagcccttcagtatggatttattgtttttgtctttcgaaccattatc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cactccggaaaggaagcccttcagtatggatttattgtttttgtctttcgaaccattatc 421
Query: 186 tctttgaccaaaatactgtctgagaagttcccgaggatccaagtcaggtaaattggagtg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tctttgaccaaaatactgtctgagaagttcccgaggatccaagtcaggtaaattggagtg 361
Query: 246 ggcagatctgtagcaagacggtgataacggggacggacgctgcatttggtgtctgcgatg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ggcagatctgtagcaagacggtgataacggggacggacgctgcatttggtgtctgcgatg 301
Query: 306 gaagcattgttgggtaattgcaatttccgatcagtagagcatgctgctcctaaagaaaaa 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 300 gaagcattgttgggtaattgcaatttccgatcagtagagcatgctgctcctaaag-aaaa 242
Query: 366 aaaaagttactgtcgaaatgctgtcttctactccgc 401
||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaaagttactgtcgaaatgctgtcttctactccgc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 800
Length adjustment: 9
Effective length of query: 392
Effective length of database: 791
Effective search space: 310072
Effective search space used: 310072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_e13.g1 MSMg01no364_e13.g1 CHROMAT_FILE:
MSMg01no364_e13.g1 PHD_FILE: MSMg01no364_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:20 2005
(407 letters)
>mm_chr18_79141807_79142613
Length = 807
Score = 787 bits (407), Expect = 0.0
Identities = 407/407 (100%)
Strand = Plus / Plus
Query: 1 atctttttgtcgccatgccagttaatgagacaaagtgcaaagcctcctcctttctgatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctttttgtcgccatgccagttaatgagacaaagtgcaaagcctcctcctttctgatca 260
Query: 61 cttctgcgtgaatgactgtaatcaggctgttcttaaggagcttggggtaataatgagacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttctgcgtgaatgactgtaatcaggctgttcttaaggagcttggggtaataatgagacc 320
Query: 121 gttaaagacttctagtggtggcctttggaaggaacagggtccagagaggctgcttaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttaaagacttctagtggtggcctttggaaggaacagggtccagagaggctgcttaattg 380
Query: 181 tagctactcaactaagtctctcctcttctgggctttaaagcaaactggagggctaaggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagctactcaactaagtctctcctcttctgggctttaaagcaaactggagggctaaggag 440
Query: 241 atagctgaatgggtaaactgctgggcaagcctgaggacatgagtttaaatgctcaacagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atagctgaatgggtaaactgctgggcaagcctgaggacatgagtttaaatgctcaacagc 500
Query: 301 cacagaaagctcttacagtagcacaggatatgcaatgctgctccagtgttcttactacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacagaaagctcttacagtagcacaggatatgcaatgctgctccagtgttcttactacaa 560
Query: 361 ggtaattggcatacacagaagaatccccgtggagatcacgggctagt 407
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtaattggcatacacagaagaatccccgtggagatcacgggctagt 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
