Query= MSMg01no366_d07.b1 MSMg01no366_d07.b1 CHROMAT_FILE:
MSMg01no366_d07.b1 PHD_FILE: MSMg01no366_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:59 2005
(473 letters)
>mm_chr18_80851878_80852749
Length = 872
Score = 853 bits (441), Expect = 0.0
Identities = 462/469 (98%), Gaps = 1/469 (0%)
Strand = Plus / Minus
Query: 5 ggaattccctaatgatttcgaatatttttacttctgaactggagcacagtttcctactgg 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ggaattccctaatgatttggaatatttttacttctgaactggagcacagtttcctactgg 613
Query: 65 gagcgtagggagctcctgataagatgggacacaaaggcccttttaggatggccggctggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gagcgtagggagctcctgataagatgggacacaaaggcccttttaggatggccggctggc 553
Query: 125 tccctgcctgggagaggctgagttctgaacagcacttggttaactggcttctgagcaggg 184
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 552 tccctgcctgggagaggctgagttctgaacagcacttggttaactggcctctgagcaggg 493
Query: 185 aggaggggggtctgaactgaggagtctgtggacgcatccaatggtctagggcccccctca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aggaggggggtctgaactgaggagtctgtggacgcatccaatggtctagggcccccctca 433
Query: 245 tggccgatacctgatgattccctcaggagtatgtatttactatctccacgtaatttgccc 304
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 432 tggccgatacctgatgattccctcaggagtatg-aaggactatctccacgtaatttgccc 374
Query: 305 cccaccaccccatcccccgtctcctgccagaagcaacctgctaggtgtacagtcagaagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cccaccaccccatcccccgtctcctgccagaagcaacctgctaggtgtacagtcagaagt 314
Query: 365 ccattcagccactgtcagagcgagaagagtgcagcagagtcactgtttcgtctatttgac 424
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccattcagccaccgtcagagcgagaagagtgcagcagagtcactgtttcgtctatttgac 254
Query: 425 aactgcagctggaggacctgggtctggatgggaccagtgctttgaatgc 473
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aactgcagctggaggacctgggtctggatgggaccagtgctttgaatgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 872
Length adjustment: 10
Effective length of query: 463
Effective length of database: 862
Effective search space: 399106
Effective search space used: 399106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_d07.g1 MSMg01no366_d07.g1 CHROMAT_FILE:
MSMg01no366_d07.g1 PHD_FILE: MSMg01no366_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:59 2005
(440 letters)
>mm_chr18_80637145_80637984
Length = 840
Score = 851 bits (440), Expect = 0.0
Identities = 440/440 (100%)
Strand = Plus / Plus
Query: 1 acctggccaggggatacctgtatctcagcctgcttcagacaccaagttaagagtggggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctggccaggggatacctgtatctcagcctgcttcagacaccaagttaagagtggggtc 260
Query: 61 agatgacatcacccaccaactggatacagacggctctcaagccacacgtttactctgccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatgacatcacccaccaactggatacagacggctctcaagccacacgtttactctgccc 320
Query: 121 gagtctcattagggagtgcctgcagatgtccctgacttcactcagtgacaagtcttggcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagtctcattagggagtgcctgcagatgtccctgacttcactcagtgacaagtcttggcg 380
Query: 181 actccactatactagccaccaagtacagagcaaaacttacaaccttacaaccagggtgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actccactatactagccaccaagtacagagcaaaacttacaaccttacaaccagggtgat 440
Query: 241 gcagctcatcttggtgctgttgccaagcgccctgtcacaatgggtctgcagagagttcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcagctcatcttggtgctgttgccaagcgccctgtcacaatgggtctgcagagagttcta 500
Query: 301 ggcccaggcctggctgcctgtcactctgtagaggtacaaggctgaattcccaggcaggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcccaggcctggctgcctgtcactctgtagaggtacaaggctgaattcccaggcaggca 560
Query: 361 caggagccacacaagttgttggatggctagaagagcagtccatactattatgctgtgggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caggagccacacaagttgttggatggctagaagagcagtccatactattatgctgtgggc 620
Query: 421 ccgaggagactctacagctg 440
||||||||||||||||||||
Sbjct: 621 ccgaggagactctacagctg 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
