Query= MSMg01no367_o09.b1 MSMg01no367_o09.b1 CHROMAT_FILE:
MSMg01no367_o09.b1 PHD_FILE: MSMg01no367_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:11 2005
(514 letters)
>mm_chr18_64862919_64863830
Length = 912
Score = 967 bits (500), Expect = 0.0
Identities = 510/514 (99%), Gaps = 2/514 (0%)
Strand = Plus / Minus
Query: 1 cctacattggacatgcttttaccaacgagccatctcatggtctctggtatgaacatttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 cctacattggacatgcttttaccaacgagccatctcatggtctctggtatgaacatttga 755
Query: 61 aaggctttgtacatatcaattgccaaattgctttccaataagcagtgacagtccagtcgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 aaggctttgtacatatcaattgccaaattgctttccaataagcagtgacagtccagtcgc 695
Query: 121 ccacagtgtagacaggtcctgtcgtctgaattcttgctcctattggagaatctttaatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 ccacagtgtagacaggtcctgtcgtctgaattcttgctcctattggagaatctttaatga 635
Query: 181 tgtaaataataaaaaaaaaaatctttgttgtttcaatttgggctgaattaccttttcttt 240
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tgtaaataat--aaaaaaaaatctttgttgtttcaatttgggctgaattaccttttcttt 577
Query: 241 ggttgaatttgacattctgtagtgttggaaatgaaagtgagagattcatgtatgcaggaa 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 576 ggttgaatttgacattctgtagtgttggaaatgaaagtgagagactcatgtatgccggaa 517
Query: 301 agtcaacagacccacatctgatattcaactaccactccctctgcaaggctcctgggcagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 agtcaacagacccacatctgatattcaactaccactccctctgcaaggctcctgggcagc 457
Query: 361 agatttgagggagtgcaggagatggaaggctggaccaggaactgcagtaatgcagctctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 agatttgagggagtgcaggagatggaaggctggaccaggaactgcagtaatgcagctctc 397
Query: 421 atgagtaatcacccatactgggatggtgctgtgtgatgtaggaacttgtgtatcatccat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atgagtaatcacccatactgggatggtgctgtgtgatgtaggaacttgtgtatcatccat 337
Query: 481 gtctctgccactaatgaacatcctaattccattt 514
||||||||||||||||||||||||||||||||||
Sbjct: 336 gtctctgccactaatgaacatcctaattccattt 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 912
Length adjustment: 10
Effective length of query: 504
Effective length of database: 902
Effective search space: 454608
Effective search space used: 454608
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_o09.g1 MSMg01no367_o09.g1 CHROMAT_FILE:
MSMg01no367_o09.g1 PHD_FILE: MSMg01no367_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:11 2005
(241 letters)
>mm_chr18_64693822_64694462
Length = 641
Score = 451 bits (233), Expect = e-131
Identities = 239/241 (99%)
Strand = Plus / Plus
Query: 1 tctgcctctgcctcccaggctctgggattaagggcatgagctaccattgcctggcaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgcctctgcctcccaggctctgggattaagggcatgagctaccattgcctggcaggaa 260
Query: 61 tgcataatttaaaatgcctagaccaaataaaaaaggtcgattgcctgctataagctgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcataatttaaaatgcctagaccaaataaaaaaggtcgattgcctgctataagctgata 320
Query: 121 aaggaaagggggaggacgcttttgttaatgctgcaccaaggaacaatggaagcttggcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggaaagggggaggacgcttttgttaatgctgcaccaaggaacaatggaagcttggcgc 380
Query: 181 tgaggcggagctctcagccagatccctgctttgtgagtactcggcccttggggtcatttg 240
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 tgaggtggagctctcagccagatccctgctttgtgagcactcggcccttggggtcatttg 440
Query: 241 g 241
|
Sbjct: 441 g 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
