Query= MSMg01no368_i13.b1 MSMg01no368_i13.b1 CHROMAT_FILE:
MSMg01no368_i13.b1 PHD_FILE: MSMg01no368_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:00 2005
(443 letters)
>mm_chr18_55948870_55949709
Length = 840
Score = 787 bits (407), Expect = 0.0
Identities = 429/438 (97%), Gaps = 3/438 (0%)
Strand = Plus / Plus
Query: 5 gaattcaactattatgacccccagcgacttctgaaggtatgatccaaggatattttgaca 64
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaactattatgaccctcagtgacttctgaaggtatgatccaaggatattttgaca 264
Query: 65 taattcagacagggaatgaactttctcttcatctatattaatgctgattttccaggaata 124
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taattcatacagggaatgaactttctcttcatctatattaatgctgattttccaggaata 324
Query: 125 cagaatgcaagagttatgagttaagagttatgagttatagaagtttccccacatttttag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagaatgcaagagttatgagttaagagttatgagttatagaagtttccccacatttttag 384
Query: 185 gagggcttggaagatgatgaagcgtttgataggatcaacggaactgcaatcaatgtctgg 244
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gagggcttggaagatgataaagcgtttgataggatcaacggaactgcaatcaatgtctgg 444
Query: 245 tgatatttaacgaagagatgatggagaaggtactcttgtagtacagacaccaggaagctg 304
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 tgatatttaacgaagagatgatggagaaggtactct---agtacagacaccaggaagctg 501
Query: 305 aaagaagccaggatgtaaccacgcaggttgtagccatcaagactcttaagagatgtcctt 364
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 502 aaagaagccaggatgtaaccacgcaggttgcagccatcaagactcttaagagatgtcctt 561
Query: 365 cacactactgtgtcctagatgccagacacggagctgtagtatttaatatatactttacca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cacactactgtgtcctagatgccagacacggagctgtagtatttaatatatactttacca 621
Query: 425 ggccctggnctttctttg 442
|||||||| |||||||||
Sbjct: 622 ggccctggcctttctttg 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 840
Length adjustment: 9
Effective length of query: 434
Effective length of database: 831
Effective search space: 360654
Effective search space used: 360654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_i13.g1 MSMg01no368_i13.g1 CHROMAT_FILE:
MSMg01no368_i13.g1 PHD_FILE: MSMg01no368_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:00 2005
(476 letters)
>mm_chr18_55959035_55959910
Length = 876
Score = 768 bits (397), Expect = 0.0
Identities = 418/425 (98%), Gaps = 1/425 (0%)
Strand = Plus / Minus
Query: 1 ataatttgtgggctgaagagatggggcctggttggaaaaattcaggtgctgaggaatcag 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 456 ataatttgtgggctgaagagatggggcctggttggaagaattcaggtgctgaggaatcag 397
Query: 61 ctctagcctgtcctgctacctgctgtttctctgttttctgccatcatgagtacaccattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctctagcctgtcctgctacctgctgtttctctgttttctgccatcatgagtacaccattt 337
Query: 121 tggtcttcagtgtcttcttagaccatgatgttgtgcatcaccaagtgaccatggactgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tggtcttcagtgtcttcttagaccatgatgttgtgcatcaccaagtgaccatggactgag 277
Query: 181 cagtgtaaatccgtgagccagcacaagtcccccttgctcttaaatcctttcttttgagtc 240
|||||||||| | ||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 276 cagtgtaaattcatgagctagcacaagtcctccttgctcttaaatcctttcttttgagtc 217
Query: 241 ccttttgtgaagtttttttatttcttatttttttacatatatgagcattctgcctgtgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ccttttgtgaagtttttttatttcttatttttttacatatatgagcattctgcctgtgtg 157
Query: 301 tatgtaaatgcaccacatgtgtacagtatctgtgaaggtcagaaaaggtcatcagattcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tatgtaaatgcaccacatgtgtacagtatctgtgaaggtcagaaaaggtcatcagattcc 97
Query: 361 ctggaactggagtaaaaggtgtaaactggctttgtggatgttagctaccaaacccaggta 420
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 96 ctggaactggagtaacaggtgtaaactggctt-gtggatgttagctaccaaacccaggta 38
Query: 421 ttctt 425
|||||
Sbjct: 37 ttctt 33
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
