Query= MSMg01no370_b05.b1 MSMg01no370_b05.b1 CHROMAT_FILE:
MSMg01no370_b05.b1 PHD_FILE: MSMg01no370_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:00 2005
(319 letters)
>mm_chr18_34021129_34021848
Length = 720
Score = 571 bits (295), Expect = e-167
Identities = 314/325 (96%), Gaps = 9/325 (2%)
Strand = Plus / Plus
Query: 4 ggaattcagctcctaataaagagggagatgtccacatatacaatgcttaaccctactgct 63
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 204 ggaattcagctcctaataaagagggagatgtccacatatacaatgtttaaccctactgct 263
Query: 64 tcagaggagaaatcacacttaaactctgtcaggagagtctcagggagaaccagtgggggg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcagaggagaaatcacacttaaactctgtcaggagagtctcagggagaaccagtgggggg 323
Query: 124 -gggggagcccccagcgcactgaacaatcaggtggatcaaattaaagtatataaaagatg 182
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aggggcagcccccagcgcactgaacaatcaggtggatcaaattaaagtatataaaagatg 383
Query: 183 taatatgtcatgaaataggtatacaagaatctttaactgccatcttaatctagtgattat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taatatgtcatgaaataggtatacaagaatctttaactgccatcttaatctagtgattat 443
Query: 243 ttaatatataagtaactaaaaacacattaaagataacatgtatgtgtgtgtgtgtgtgtg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttaatatataagtaactaaaaacacattaaagataacatgtatgtgtgtgtgtgtgtgtg 503
Query: 303 --------agaaatgccactttaaa 319
|||||||||||||||||
Sbjct: 504 tgtgtgtgagaaatgccactttaaa 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_b05.g1 MSMg01no370_b05.g1 CHROMAT_FILE:
MSMg01no370_b05.g1 PHD_FILE: MSMg01no370_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:00 2005
(363 letters)
>mm_chr15_8963944_8964705
Length = 762
Score = 642 bits (332), Expect = 0.0
Identities = 359/376 (95%), Gaps = 13/376 (3%)
Strand = Plus / Plus
Query: 1 tcattctcttaacaacctagaaggaggcattattattcttttttaataaccatggcgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tcattctcttaacaacctagaaggaggcattattattcttttttaataaccatggcgatg 246
Query: 61 gatcagaatggttacctgacttgcccaaggtcactgggccaaggtcactgggc------- 113
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 247 gatcagaatggttacctgacttgcccaaggtcattgggccaaggtcactgggcaaggtca 306
Query: 114 ------tagtaggtggaatattttgatctcttaaatgggaacttgctttggtcacaagga 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ctgggctagtaggtggaatattttgatctcttaaatgggaacttgctttggtcacaagga 366
Query: 168 agggctgcctgcttgcttcccccaccctgccccatttatcacaactcaatcttggcaggc 227
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 367 agggctgcctgcttgcttcccccaccctgccccatttatcacaactctatcttggcaggc 426
Query: 228 agtctccccctctttctgctgtgaatcatttgcagtagtgtgctgagcatctcatgaagg 287
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 actctccccctctttctgctgtgaatcatttgcagtagtgtgctgagcatctcatgaagg 486
Query: 288 gttttaggatgtgccatggagtaccaagagaaggacacctaaatcaggccgagggccaaa 347
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gttttagaatgtgccatggagtaccaagagaaggacacctaaatcaggccgagggccaaa 546
Query: 348 tggagtagtcttcccc 363
||||||||||||||||
Sbjct: 547 tggagtagtcttcccc 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 762
Length adjustment: 9
Effective length of query: 354
Effective length of database: 753
Effective search space: 266562
Effective search space used: 266562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
