Query= MSMg01no371_p05.b1 MSMg01no371_p05.b1 CHROMAT_FILE:
MSMg01no371_p05.b1 PHD_FILE: MSMg01no371_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:35 2005
(506 letters)
>mm_chr18_71032862_71033767
Length = 906
Score = 768 bits (397), Expect = 0.0
Identities = 421/429 (98%), Gaps = 2/429 (0%)
Strand = Plus / Plus
Query: 79 aagaagattgttcctgattgaaaaggcaaaaattaaaaccagaggtttgcagtggagaaa 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aagaagattgttcctgattgaaaaggcaaaaattaaaaccagaggtttgcagtggagaaa 338
Query: 139 gtgacaaagtccagacaccccattatcaacctccaagttcttggatctctggtcatatct 198
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 339 gtgacatagtccagacaccccattatcaacctccaagttcttggatctctggccatatct 398
Query: 199 aaagtctacctccatttgtgaattttccagatataggaactcattgttattctccacccc 258
|||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 399 aaagtctacccccatttgtgaattttccagatataggaactcatttttgttctccacccc 458
Query: 259 cagactaaattaggtttatattacaagacta-ctacgatcagtagctggggaataggaag 317
|||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 459 cagactaaatgaggtttatattacaagactaac-acgatcagtagctggggaataggaag 517
Query: 318 aacttcatttcactctccttaggcttattagagatgcatttctgattgttaccaatacat 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 aacttcatttcactctccttaggcttattagagatgcatttctgattgttaccaatacat 577
Query: 378 caggaaagccatcaatacaattagtctcaaatactacatgcattacatggtatatacttt 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 caggaaagccatcaatacaattagtctcaaatactacatgcattacatggtatatacttt 637
Query: 438 ctaaagttgcatccagttctaaggaggtattcataaaataaatggttatgatgagaggat 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ctaaagttgcatccagttctaaggaggtattcataaaataaatggttatgatgagaggat 697
Query: 498 aggctaatt 506
|||||||||
Sbjct: 698 aggctaatt 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_p05.g1 MSMg01no371_p05.g1 CHROMAT_FILE:
MSMg01no371_p05.g1 PHD_FILE: MSMg01no371_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:35 2005
(503 letters)
>mm_chr18_71179829_71180731
Length = 903
Score = 549 bits (284), Expect = e-160
Identities = 296/300 (98%)
Strand = Plus / Minus
Query: 5 gaattcagaatccatcagtctgaataccagtctagagccttccagtctctggaactgtgg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gaattcagaatccatcagtctgaataccagtctagagccttccagtctctggaactgtgg 255
Query: 65 ggatacattaatttgatctaaaaacatgtatctcagtttgcattacccactgtgatggtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ggatacattaatttgatctaaaaacatgtatctcagtttgcattacccactgtgatggtt 195
Query: 125 tgtatacactaagcccagagaatggcatgattagaagatgtggccctgttggagtaggtg 184
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tgtatacactaagtccagagagtggcatgattagaagatgtggccctgttggagtaggtg 135
Query: 185 tgacactgtgggtatgggctttaagactctcattatagcttcctagaagccagcattctg 244
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 134 tgacactgtgggtatgggctttaagactctcattgtagcttcctagaagccagcattctg 75
Query: 245 ttacaaccttcagatgaagatgaacaactctcagatcctcctgcattatgcctgcctgga 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 74 ttacaaccttcagatgaagatgaacaactctcagctcctcctgcattatgcctgcctgga 15
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
