Query= MSMg01no376_h14.b1 MSMg01no376_h14.b1 CHROMAT_FILE:
MSMg01no376_h14.b1 PHD_FILE: MSMg01no376_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:23 2005
(533 letters)
>mm_chr18_4960132_4961064
Length = 933
Score = 961 bits (497), Expect = 0.0
Identities = 521/529 (98%)
Strand = Plus / Plus
Query: 5 gaattcttcatcttgcttttttttaggtcttcctgagctgcccagtggctgcctacttgt 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 gaattcttcatcaggcttttttttaggtcttcctgagctgcccagtggctgcctacctgt 264
Query: 65 cttccctcgctcctgttttgaccagtgtctagttgtggtcccttgccctcttctgatcaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttccctcgctcctgttttgaccagtgtctagttgtggtcccttgccctcttctgatcaa 324
Query: 125 ctcccaatggagagaacccccttcccagtggatctgtgggatgtctctgcagcctgttat 184
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctcccaacggagagaacccccttcccagtggatctgtgggatgtctctgcagcctgttat 384
Query: 185 aggagggcccacatcattctatcctacactcagtgccctgtgttgacgaaccttcttctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggagggcccacatcattctatcctacactcagtgccctgtgttgacgaaccttcttctg 444
Query: 245 tccctaaggccaaccctacaggtagcatccgcatatcctggttacagtcatccctgccac 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 tccctaaggccaaccctacaggtagcatccacatatcctggttacagtcatccctgccac 504
Query: 305 ctcatcgcacccaactccacctttcttctatccattctgtgctttcacatgtaaatcttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctcatcgcacccaactccacctttcttctatccattctgtgctttcacatgtaaatcttt 564
Query: 365 gtggtcccagaacttaagtccagggtttcagtgtggcatcagaggtctttctggtgcagg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtggtcccagaacttaagtccagggtttcagtgtggcatcagaggtctttctggtgcagg 624
Query: 425 cctctagactccagccttgcccaggcatctcatttgtggacgtgtgtggtcccagctctg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cctctagactccagccttgcccaggcatctcatttgtggacgtgtgtggtcccagctctg 684
Query: 485 caagtagcaggctcagtctcaaccgtatggttttacacataccccttct 533
|||||| ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 685 caagtaccaggctcagtctcaaccatatggctttacacataccccttct 733
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_h14.g1 MSMg01no376_h14.g1 CHROMAT_FILE:
MSMg01no376_h14.g1 PHD_FILE: MSMg01no376_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:23 2005
(555 letters)
>mm_chr18_5156995_5157949
Length = 955
Score = 1011 bits (523), Expect = 0.0
Identities = 547/555 (98%)
Strand = Plus / Minus
Query: 1 attttatcaagaggtgtggaaccaagagaccctgtcaccaccaggcccaccacagcaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attttatcaagaggtgtggaaccaagagaccctgtcaccaccaggcccaccacagcaggc 542
Query: 61 cccatgcatgtgagctgcagccatgtacacaggatctgcaaaagatccagcaccagggac 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 541 cccatgcatgtgagctgcagccatgtacacaggatctgcaatagatccagcaccagggac 482
Query: 121 tgagtgtcgtgggcatgcacttatcagcacataagtcatgaagcactaagtgacgactgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 481 tgagtgtcgtgggcatgcacttatcagcacataagtcatgaagcactaagtgacaactgt 422
Query: 181 ttacaggactcaaggctgctctccactgtcttaagaaagactaagagtaaaactactgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttacaggactcaaggctgctctccactgtcttaagaaagactaagagtaaaactactgta 362
Query: 241 caaagtgtaggggtcaagcccagaggatgcttatccaagccattcagagctttaaacaca 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaagtggaggggtcaagcccagaggatgcttatccaagccattcagagctttaaacaca 302
Query: 301 acaactgtgtgatatgctaggctgctaatggatgagagcctctttcccaagtagcaattg 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaactgtgtgatatgctagcctgctaatggatgagagcctctttcccaagtagcaattg 242
Query: 361 gaggtcccgtccgggtgtcgtgatgcatacctgtaatcccagctgcaaaatgctatctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaggtcccgtccgggtgtcgtgatgcatacctgtaatcccagctgcaaaatgctatctcc 182
Query: 421 tccattgcaatcatgaactcacagcagttgcagaggtctacactggggctgtgaagaacg 480
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 tccattgcaatcataaactcacagcagttgcagaggtctacactggggctatgaagaacg 122
Query: 481 gccccctaacagtcaggcatggatggaattgggattcacagggctcacccttcactgatg 540
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 121 gccccctaacagtcaggcatggatggaatcgggattcacaggactcacccttcactgatg 62
Query: 541 aactattgctactgg 555
|||||||||||||||
Sbjct: 61 aactattgctactgg 47
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
