Query= MSMg01no377_j24.b1 MSMg01no377_j24.b1 CHROMAT_FILE:
MSMg01no377_j24.b1 PHD_FILE: MSMg01no377_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:52 2005
(392 letters)
>mm_chr18_5522605_5523398
Length = 794
Score = 717 bits (371), Expect = 0.0
Identities = 384/389 (98%), Gaps = 2/389 (0%)
Strand = Plus / Minus
Query: 5 ggaattcattcatttaatcattcattcattccgttttgatcctggtaaactgtggtcccc 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 624 ggaattcattcatttaatcattcattcattccgttttgatcctggtaaactgtggttccc 565
Query: 65 atagagcagcaatggagtggtacaggcacggtctgtccaggcttcatagaaaatggattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atagagcagcaatggagtggtacaggcacggtctgtccaggcttcatagaaaatggattt 505
Query: 125 ttcaggttactttgtgtctataacacagctcaaataggacagatgtttattcttttcctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttcaggttactttgtgtctataacacagctcaaataggacagatgtttattcttttcctg 445
Query: 185 tagtgaatctgcagctgagcatgtctgaaccggttggggg--gggggaggacattctgct 242
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 444 tagtgaatctgcagctgagcatgtctgaaccggttgggggtggggggaggacattctgct 385
Query: 243 gcccctagcacgtgctcaagactgtttgcataaccatgcttccaatacagcaggaagaag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcccctagcacgtgctcaagactgtttgcataaccatgcttccaatacagcaggaagaag 325
Query: 303 aaaggaaggcaagaccttgtcctttagggaggtgacctggaaatcccttagaccattctg 362
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 324 aaagaaaggcaagaccttgtcctttagggaggtgacctggaaatcccttagaccattttg 265
Query: 363 ccccctcttccctgagtgaactcgacctc 391
|||||||||||||||||||||||||||||
Sbjct: 264 ccccctcttccctgagtgaactcgacctc 236
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 794
Length adjustment: 9
Effective length of query: 383
Effective length of database: 785
Effective search space: 300655
Effective search space used: 300655
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_j24.g1 MSMg01no377_j24.g1 CHROMAT_FILE:
MSMg01no377_j24.g1 PHD_FILE: MSMg01no377_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:52 2005
(404 letters)
>mm_chr18_5381982_5382785
Length = 804
Score = 774 bits (400), Expect = 0.0
Identities = 403/404 (99%)
Strand = Plus / Plus
Query: 1 agaagacaaatgtggtgtggatatatagcaccctgggaaaattgttagctactttggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaagacaaatgtggtgtggatatatagcaccctgggaaaattgttagctactttggaaa 260
Query: 61 gctttccaatcagtcatttaaaataaatatttgaggactagagaaatgacttaatagttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctttccaatcagtcatttaaaataaatatttgaggactagagaaatgacttaatagttg 320
Query: 121 ggactattggctgctcttctatgggacccaaatgtgattcacagtgacatacagtggttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggactattggctgctcttctatgggacccaaatgtgattcacagtgacatacagtggttc 380
Query: 181 acagccatctgtaactccagtcctaagagatctgttatcttcttgccttctcaagcacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagccatctgtaactccagtcctaagagatctgttatcttcttgccttctcaagcacca 440
Query: 241 agcaaacacatggtacacagacatacatgcaagaaaatgcccttgaacataaagtaaaaa 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaaacacatggtacacagacatacatgcaagaaaatgcccttgaacataaagtaaaaa 500
Query: 301 tctgtctcattctcttctcctctgtatttgaaatcatctgacacaggttatagtagactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgtctcattctcttctcctctgtatttgaaatcatctgacacaggttatagtagactg 560
Query: 361 gaaatacacactgatcagctctgactcaagaccagacactttag 404
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaatacacactgatcagctctgactcaagaccagacactttag 604
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
