Query= MSMg01no378_n15.b1 MSMg01no378_n15.b1 CHROMAT_FILE:
MSMg01no378_n15.b1 PHD_FILE: MSMg01no378_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:26 2005
(518 letters)
>mm_chr18_20346862_20347780
Length = 919
Score = 965 bits (499), Expect = 0.0
Identities = 514/519 (99%), Gaps = 1/519 (0%)
Strand = Plus / Plus
Query: 1 aatgagccctctgtcccacagcctggtggtgtctcactctggttggtgggcagttccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgagccctctgtcccacagcctggtggtgtctcactctggttggtgggcagttccttt 260
Query: 61 tccagtttcccaagccccacctccacaaagctgaaattaggtgactcatgtgtattttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccagtttcccaagccccacctccacaaagctgaaattaggtgactcatgtgtattttaa 320
Query: 121 taccattaaagtcttgctgacaacatggtattttttacctacctggtattaacgagtgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taccattaaagtcttgctgacaacatggtattttttacctacctggtattaacgagtgta 380
Query: 181 ctccaggttcccaaaagattctaggccttgtttaaggacctagaaataaaaactcgttat 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctccaggttcccaaaagattctgggccttgtttaaggacctagaaataaaaactcgttat 440
Query: 241 gtgttccaatccccctctcaccccttctttatggtggcccttaggaagtcagtaaattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgttccaatccccctctcaccccttctttatggtggcccttaggaagtcagtaaattct 500
Query: 301 gtgacaaaagacgttctagggtgtggacttgggagacacacccagtgataccatctaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgacaaaagacgttctagggtgtggacttgggagacacacccagtgataccatctaaag 560
Query: 361 agctgctggctttctaactggctggtcagag-agctacagtgacgtctttgggaacagtc 419
||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||
Sbjct: 561 agctgctggctttctaactggctggtcagaggagctacaatgatgtctttgggaacagtc 620
Query: 420 aaaggtggatgaatttgagagaggacgctgatatgctgtgtaatacacttgactctacca 479
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaggtggatgaatttgagagagggcgctgatatgctgtgtaatacacttgactctacca 680
Query: 480 aagtatgtatgccagacttctgtgtcactgctgactgtc 518
|||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagtatgtatgccagacttctgtgtcactgctgactgtc 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 919
Length adjustment: 10
Effective length of query: 508
Effective length of database: 909
Effective search space: 461772
Effective search space used: 461772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_n15.g1 MSMg01no378_n15.g1 CHROMAT_FILE:
MSMg01no378_n15.g1 PHD_FILE: MSMg01no378_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:26 2005
(506 letters)
>mm_chr18_20549468_20550373
Length = 906
Score = 810 bits (419), Expect = 0.0
Identities = 434/439 (98%)
Strand = Plus / Minus
Query: 1 aagaatacagatttggatttggagcctaagtagttaaagtaactcttggaagacagatgt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 439 aagaatacagatttggatttggagcctaagtagttaaagtaactctaggaagacagatgt 380
Query: 61 gcagtgtgaatgaaggcagcaaaaagtaaggaatatctgaaggtagcttttaatatgatc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 acagtgtgaatgaaggcagcaaaaagtaaggaatatctgaaggtagcttttaatatgatc 320
Query: 121 ctttttcagggctgggaataaaacacgtgtcttttcacgcagtcaactaatgcttaatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctttttcagggctgggaataaaacacgtgtcttttcacgcagtcaactaatgcttaatcc 260
Query: 181 ctgagtttcatccttggatctttgattttaatagaagagactacaagatcagtgcaaagt 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ccgagtttcatccttggatctttgattttaatagaagagactacaagatcagtgcaaagt 200
Query: 241 ttattttaattttattttatacttttaatggaaaaggtcaaccatgtgatcaatggaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ttattttaattttattttatacttttaatggaaaaggtcaaccatgtgatcaatggaaat 140
Query: 301 ggaggcagacaatcgataaggagaacaaaatgaaatagacaaggcagagaataaggctca 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 139 ggaggcagacaatcgataaggagaacaaaatgaaatagataaggcagagaataaggctca 80
Query: 361 tccattgataagtaacagctgggtggccaacatgccaagggatagctctaggaaagcaga 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 79 tccattgataagtaacagctgggtggccaacatgtcaagggatagctctaggaaagcaga 20
Query: 421 aagttgatcctgcttttag 439
|||||||||||||||||||
Sbjct: 19 aagttgatcctgcttttag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
