Query= MSMg01no380_m08.b1 MSMg01no380_m08.b1 CHROMAT_FILE:
MSMg01no380_m08.b1 PHD_FILE: MSMg01no380_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:56 2005
(242 letters)
>mm_chr18_60985829_60986470
Length = 642
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%)
Strand = Plus / Plus
Query: 1 aaaactattggctttgttttttttcaaaatagagacccccagatctgcaagaccacttta 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaattattggctttgttttttttcaaaatagagacccccagatctgcaagaccacttta 260
Query: 61 aaggttcaattttagcataatgctcattttaattgtgcaagtctactcacacagagaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggttcaattttagcataatgctcattttaattgtgcaagtctactcacacagagaaaa 320
Query: 121 accaaggcaaccttccatactggctgtctgtcctttaggagtgagggaggtacctcagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accaaggcaaccttccatactggctgtctgtcctttaggagtgagggaggtacctcagaa 380
Query: 181 tgactgcagagccagagggcaaaagccaagcctggaagggggctaaagggacagctgggc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agactgcagagccagagggcaaaagccaagcctggaagggggctaaagggacagctgggc 440
Query: 241 ag 242
||
Sbjct: 441 ag 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no380_m08.g1 MSMg01no380_m08.g1 CHROMAT_FILE:
MSMg01no380_m08.g1 PHD_FILE: MSMg01no380_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:56 2005
(240 letters)
>mm_chr18_61158421_61159061
Length = 641
Score = 435 bits (225), Expect = e-126
Identities = 237/241 (98%), Gaps = 1/241 (0%)
Strand = Plus / Minus
Query: 1 tcattgccttgcttcc-accactgtgtgacctggggggccaagctttccccttctctgaa 59
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcattgccctgcttccaaccactgtgtgacctggggggccaagctttccccttctctgaa 382
Query: 60 cctcagagtcctcctaggcctcccagagatctgccagttgctcccttgctcaagaaccag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcagagtcctcctaggcctcccagagatctgccagttgctcccttgctcaagaaccag 322
Query: 120 gtgtgtgcagaggacagcaggacagggcggcttgagccaaggacgtcagcacttgtgttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 gtgtgtgcagaggacagcaggacagggcggcttgagccaaggacgtcagcacttgggttt 262
Query: 180 gttggatctgtggctagccccaggagcactcagatcagggctgcctttcatccgttaggt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 gttggatctgtggctagccccaggagcactcagatcagggctgcctttcatccattaggt 202
Query: 240 c 240
|
Sbjct: 201 c 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 641
Length adjustment: 9
Effective length of query: 231
Effective length of database: 632
Effective search space: 145992
Effective search space used: 145992
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|