Query= MSMg01no381_i10.b1 MSMg01no381_i10.b1 CHROMAT_FILE:
MSMg01no381_i10.b1 PHD_FILE: MSMg01no381_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:58 2005
(411 letters)
>mm_chr18_63482682_63483492
Length = 811
Score = 611 bits (316), Expect = e-179
Identities = 356/370 (96%), Gaps = 4/370 (1%)
Strand = Plus / Plus
Query: 5 gaattctccgact-t-tccaaatcttatttctccctaatcagatagttccatgtgtggtg 62
||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccgactgtat--aaatcttatttctccctaatcagatagttccatgtgtggtg 262
Query: 63 tataatgaatttctgagcaactttattaccctgctgtgtgtgtctgtggtggggtacact 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tataatgaatttctgagcaactttattaccctgctgtgtgtgtctgtggtggggtacact 322
Query: 123 gggctcaacacatgacatcaacatgtgatagaaagctctctacactgagaatctgggaac 182
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 323 gggctcaacacatgacatcagtatgtgatagaaagctctctacactgagaatctgagaac 382
Query: 183 ttgtcctctatggggattgtgggatccagtccctaactagtttttcaaatcagaagtttt 242
|||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 383 ttgtcctctacggggattgtgggatccagcccctaactagtttttcaaaacagaagtttt 442
Query: 243 agtgtttgggcatataaatgatcttctttctttatcattgcagtctataacccaggcatc 302
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 443 agtgtttgggcatataaatgatcttctttctttatcagtgcagtctataacccaggcatc 502
Query: 303 gaaaggtatttctattcgaatagtcttcatcttgctgatgacaccaagttcaagataagt 362
||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 503 aaaaggtatttctattcgaatagtcttcatcttgctgacgacaccaagctcaagataagt 562
Query: 363 ggatgcttct 372
||||||||||
Sbjct: 563 ggatgcttct 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_i10.g1 MSMg01no381_i10.g1 CHROMAT_FILE:
MSMg01no381_i10.g1 PHD_FILE: MSMg01no381_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:58 2005
(355 letters)
>mm_chr18_63664481_63665235
Length = 755
Score = 588 bits (304), Expect = e-172
Identities = 338/352 (96%), Gaps = 8/352 (2%)
Strand = Plus / Minus
Query: 1 tcccatctcaagttatccagttgtaaaagcagcccgactttgcttgtgtggtatgatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tcccatctcaagttatccagttgtaaaagcagcccgactttgcttgtgtggtatgatgct 489
Query: 61 taatctcaacttccattcacatagacaatgtgacctgtgacatgcaaaggggtatttccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 taatctcaacttccattcacatagacaatgtgacctgtgacatgcaaaggggtatttccc 429
Query: 121 atagactccttagagtgtataaactgaagagcaagtttctcttgagaatcagtgagttga 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 atagactccttatagtgtataaactgaagagcaagtttctcttgagaatcagtgagttga 369
Query: 181 tggctgagaagacaggatctccctgaaacagggtgtggaacttcatgtgaaaattttaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tggctgagaagacaggatctccctgaaacagggtgtggaacttcatgtgaaaattttaaa 309
Query: 241 gatgatttgtttgttcaa-aaactccacccagtgttgactgactaaggcaactttatttt 299
||||||||| || |||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 308 gatgatttgagtggtcaagaaactccacccagtgttgact----aaggcaactttatttt 253
Query: 300 ttattttcaattctttcttt-ctttttaaaataacagtgtt--gtgtgtgtg 348
|||||||||||||||| ||| ||||||||||||||| |||| |||||||||
Sbjct: 252 ttattttcaattcttttttttctttttaaaataacaatgttaagtgtgtgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space: 258116
Effective search space used: 258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
