Query= MSMg01no382_a10.b1 MSMg01no382_a10.b1 CHROMAT_FILE:
MSMg01no382_a10.b1 PHD_FILE: MSMg01no382_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:38 2005
(634 letters)
>mm_chr18_15417538_15418568
Length = 1031
Score = 1110 bits (574), Expect = 0.0
Identities = 610/624 (97%), Gaps = 5/624 (0%)
Strand = Plus / Minus
Query: 12 gaattcttctacagatacttaaaatggagcatccatgacaatgagcaacttaactccagg 71
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 gaattcttctacagatagttaaaatggagcatccatgacaatgagcaacttaactccagg 772
Query: 72 cgggcaggaaactggtccaggctacatcactccctagcatacactccacactgtttgagg 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 cgggcaggaaactggtccaggctacatcactccctagcatacactccacactgtttgagg 712
Query: 132 agtcctagttgaccagcctcaagagctgttaccaactatgtgctcaagtcatagtcagaa 191
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 711 agtcctagttgaccagcctcaagagctgttacc----atgtgctcaagtcatagtcagaa 656
Query: 192 gctcctagcacaagctttgcaagagaagccatgccaggctccttcacactgggtctatgc 251
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 655 gctcctagcacaagctttgcaagaggagccatgccaggctccttcacactgggtctatgc 596
Query: 252 acagggctaaggctggaatacatttaggaacatatgaaaagtacacactatggtgaaatg 311
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 595 acagggctaaggctggaatacatttaggaacatatgaaaagtacacattatggtgaaatg 536
Query: 312 tgaatgcattttggggtcttatggtgaataggaaatgagtgtagcctccacaactaagca 371
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 535 tgaatgcattttggggtcttatggtgaataggaaatgaatgtagcctccacaactaagca 476
Query: 372 agcaggcaggcaattgctttgcctttcttcccaaaaggtcctccatatttccagatttct 431
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 475 agcaggcaggcaattgctttgcctttcttcccaaaaggtccttcatatttccagatttct 416
Query: 432 gtagagttgttcagtctagccacagtgctggccaaagctgtctgcatcactgagcactct 491
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 415 gtagagttgttcagtctagccacagtgctagccaaagctgtctgcatcactgagcactct 356
Query: 492 caagatctgataagaatggatggaatactctgatatttttaaataaaccttagcaacaga 551
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 355 caagatctgataaaaatggatgggatactctgatatttttaaataaaccttagcaacaga 296
Query: 552 actacaacagagctctatcagaagtagagtgtccctgaattcttttccttctcctttaaa 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 actacaacagagctctatcagaagtagagtgtccctgaattcttttccttctcctttaaa 236
Query: 612 aacaaaa-ttcaagagtgagtcta 634
|| |||| ||||||||||||||||
Sbjct: 235 aaaaaaaattcaagagtgagtcta 212
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1031
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1021
Effective search space: 637104
Effective search space used: 637104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_a10.g1 MSMg01no382_a10.g1 CHROMAT_FILE:
MSMg01no382_a10.g1 PHD_FILE: MSMg01no382_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:38 2005
(517 letters)
>mm_chr18_15209065_15209981
Length = 917
Score = 961 bits (497), Expect = 0.0
Identities = 511/519 (98%), Gaps = 6/519 (1%)
Strand = Plus / Plus
Query: 5 ttaggagtttggggatcaggcccactcatagatgggctctgtgaggtaactgtgaaagca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 199 ttaggagtttggggatcaggcccactcatagatgggctctgtgaggtaactgtgagagca 258
Query: 65 gaggtcagagaggaccagagcccaaagatgcaacaaaattcatcatctatcatgaggtca 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 259 gaggtcagagaggaccagagcccacagatgcaacaaaattcatcatctatcatgaggtca 318
Query: 125 gtggtctccagtgttcccagtctagtccacagagaaggaattgaagaggcccctgcccag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtggtctccagtgttcccagtctagtccacagagaaggaattgaagaggcccctgcccag 378
Query: 185 cccctggaacacagacatagggcccctgaagacagacatagggctttactcaaaaattgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cccctggaacacagacatagggcccctgaagacagacatagggctttactcaaaaattgc 438
Query: 245 atttttccctacatgtaatattttttttttt------gcttacaaaatgacagtaactac 298
||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 439 atttttccctacatgtaatatttttttttttttttttgcttacaaaatgacagtaactac 498
Query: 299 ttctagaatggctatgtcttgataatcaatctttcctcctttcttccacacccccttttt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttctagaatggctatgtcttgataatcaatctttcctcctttcttccacacccccttttt 558
Query: 359 agtgtttcattctgtttttgaaacagtatctcatgtactctggactggccttgaactcat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agtgtttcattctgtttttgaaacagtatctcatgtactctggactggccttgaactcat 618
Query: 419 tatgtagctgagggtgaccttgaaccctgatcttctttcctccatctcacaaccactggg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tatgtagctgagggtgaccttgaaccctgatcttctttcctccatctcacaaccactggg 678
Query: 479 tttgtaaagcatgtgtcatcaacatctggttaattttgt 517
|||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tttgtaaagcatgtgtcatcaacatctggttaattttgt 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
