Query= MSMg01no383_a14.b1 MSMg01no383_a14.b1 CHROMAT_FILE:
MSMg01no383_a14.b1 PHD_FILE: MSMg01no383_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:58 2005
(545 letters)
>mm_chr18_40100815_40101759
Length = 945
Score = 1023 bits (529), Expect = 0.0
Identities = 538/541 (99%)
Strand = Plus / Minus
Query: 5 gaattctagaaattacccattaagatttgttactatgtcctcaaaagggaggaggatttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gaattctagaaattacccattaagatttgttactatgtcctcaaaagggaggaggatttt 686
Query: 65 taaggacatgtcaatgacatagaccagctcaagtttctctgccagtgactgagactgatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taaggacatgtcaatgacatagaccagctcaagtttctctgccagtgactgagactgatc 626
Query: 125 atgggatggcccctcatctagcatcctcctaagaagcaggcttcactggaagttgttaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atgggatggcccctcatctagcatcctcctaagaagcaggcttcactggaagttgttaat 566
Query: 185 ctcagccttgttcttcaatttatatataaactctctccagttgctttcaaaccttaaagt 244
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 565 ctcagccttgttcttcaatttatatataaactctccccagttgctttcaaaccttaaagt 506
Query: 245 gccctaactatccccaaagaatagtttaaaataaaaacttaggcttagtagatctaaagc 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 505 gccctaactatccccaaagaatagtttaaaataaaaacttaggctcagtagatctaaagc 446
Query: 305 atcactacaagctgcaattttagacatcagtctaagtatttagaatatagatagttgcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atcactacaagctgcaattttagacatcagtctaagtatttagaatatagatagttgcaa 386
Query: 365 aattgagatccaacttggagaaatacaaactatagttggaggtttaggtttcagcaatgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aattgagatccaacttggagaaatacaaactatagttggaggtttaggtttcagcaatgg 326
Query: 425 ggtaggtctaagttctgacttggtgtgagttgtctgagttcattaagctagataatcaca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtaggtctaagttctgacttggtgtgagttgtctgagttcattaagctagataatcaca 266
Query: 485 cagacattaagtagtatctccctgtttccccatgtgacatagggacattgtgaattccaa 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagacattaagtagtatctccctgtttccccatgtgacatagggacattgtgaattccaa 206
Query: 545 t 545
|
Sbjct: 205 t 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_a14.g1 MSMg01no383_a14.g1 CHROMAT_FILE:
MSMg01no383_a14.g1 PHD_FILE: MSMg01no383_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:58 2005
(527 letters)
>mm_chr18_39919782_39920707
Length = 926
Score = 996 bits (515), Expect = 0.0
Identities = 524/527 (99%), Gaps = 1/527 (0%)
Strand = Plus / Plus
Query: 1 acttggctctatagttccttttctttcagaattctaataaactcaaagacagcattgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttggctctatagttccttttctttcagaattctaataaactcaaagacagcattgaag 260
Query: 61 acgtccagaaatgagtggcgtgccctttattgttctaccagttggttgaagcttcttggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgtccagaaatgagtggcgtgccctttattgttctaccagttggttgaagcttcttggc 320
Query: 121 aaaccaaagcttgcagaatatagttggaacactgtctgaaacccctttggcagctggact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaccaaagcttgcagaatatagttggaacactgtctgaaacccctttggcagctggact 380
Query: 181 ggaaaataaaaaaagcttagaagtagttagttctctgctaccaattatagacctagacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaaaataaaaaaagcttagaagtagttagttctctgctaccaattatagacctagacct 440
Query: 241 gaggccagccagcgacttgcctttatgtccctagtgctgtccccataaatccaggctcag 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggccagccagcgactcgcctttatgtccctagtgctgtccccataaatccaggctcag 500
Query: 301 acatggcaaccctcctagggatgatccacagagcaaagcaatccagggacttgcttgggt 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acatggcaaccctcctagg-atgatccacagagcaaagcaatccagggacttgcttgggt 559
Query: 361 ggctcaagacagtgtccctggaaagtggtctatacatggtactttgtacccaaagaacaa 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 560 ggctcaagacagtgtccctggaaagtggtctatacatggaactttgtacccaaagaacaa 619
Query: 421 attgtttttgggaaatatattctgggttcctttgaaaatgagtaattatccttaatttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 attgtttttgggaaatatattctgggttcctttgaaaatgagtaattatccttaatttta 679
Query: 481 tttattattattttttttacttcagatcacactgaattatttcttac 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttattattattttttttacttcagatcacactgaattatttcttac 726
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 926
Length adjustment: 10
Effective length of query: 517
Effective length of database: 916
Effective search space: 473572
Effective search space used: 473572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
