XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCA
TATAGGAATTCCAGCTCTCAGATAGGTATCTGCTGGGGAATAAGCTAAGC
ACGTGTCTCTCTTGAAAGGGAAACTTATACTTCATAGATCTTATTTGTTA
AAGAAATGGTGCAATATCATTATTTGTCCTTCAGAGGGCCATATGTATCA
TTTTTTTAAAAAAAATAACTTCATCAGTGCAAACTATTTATTTCAAATAC
TTAAGTTCAAATATAAAGGCCTCCCGGAAACTGAACAAGTGCACCGTTTC
CTGCTAATCACCCACTGAAATGCTTCAAACTCATTCATTAAAAGATAAAA
AGATTCATTTATACAAGCTCTATTACTTGATAGAAACTGTGCTGGTCTTT
TTTTTTTTTTTTTTAATTTAGACATAGCTTGGTTCCTCATCTCCAAGAAT
TTTCCACCAAATTTAGAACTTAACACATTCACACGAAGAGATTCTTAGCA
CTCTATAGCAATTTAGGAAAAGTGCTTCCTAAGTAGGGCATTCAGCAATC
AAAGGCATAATCAAAATTATGTGATCCAAAATTACTTACTACTTGCTTTG
TGAAGAACAATGAAATAAAGGCTGCCCACGAAATCAAGGGAAATACCACC
CGGGAACTCTTCACTTTTCTCCGGGTCTAACTGCTACAAGTGGCTTCTTC
CTCACCTTTATATGCCAATTATCCCCCTCTTGCCCTCACCGGCTTTTATT
AAAACCAAAATCTTTTN

GTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCAGAGCTTGTGTTGTTCTTTTCTGCTTGTTGG
CTCACCAGCTGAGCATGTGGGAGCAAGCACAGCTCTCTCACTACAGGCTT
TGGTTTGAAGTTTCTAAGAAGTGATGCTGCCCTGACCAATACCAAAACCC
TCTTTTAAGTAAGCAACTGATATTTTTTGAAGCCAATACACAAGAATGTA
AATAAGTAAGGCCATTTGTCCAGGAGGCAACGATTTTATCCTAGAAGCAA
AACTGAATAATGAAATGACATAAATTAATTTCTAAATTTTACATGGCAGT
AGGAAATACGGAATGATTTTAGAGGTCATACAACTGTACTCATGAACTTA
TGTTTTTCTAATAATAAACATGAGGAAAATACTTCATACATTTTATAGAT
GATAATTTATTATCCAAGTTACAGATAAATATGTTAAAACATCAGAAAAT
ACTTAACTTCAACTGAAAAGGACAATTCATGGTCATTAATTATAAGAAAA
AGAGAAAGATCAGTCATATAATTCTAACCAAATGTTCAGAGTTTAATAGT
GATTTCACATGTAAAGTATACCATACTTTTGAAACAGTGTATATTACAGT
TATTCAACAGCCCAATTCATTTTCCGAGAAATAAATATATTCCTAATCAC
GGGCAAAGTACTGCTTTTGGGATTTATAAAAAAAGGTCCACTTGAATAAA
GATAGAAAAAAGGTN

Query= MSMg01no383_k01.b1 MSMg01no383_k01.b1 CHROMAT_FILE:
MSMg01no383_k01.b1 PHD_FILE: MSMg01no383_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:43 2005
         (392 letters)



>mm_chr18_79716338_79717129
          Length = 792

 Score =  694 bits (359), Expect = 0.0
 Identities = 362/363 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   ataggaattccagctctcagataggtatctgctggggaataagctaagcacgtgtctctc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ataggaattccagctctcagataggtatctgctggggaataagctaagcacgtgtctctc 491

                                                                       
Query: 65  ttgaaagggaaacttatacttcatagatcttatttgttaaagaaatggtgcaatatcatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttgaaagggaaacttatacttcatagatcttatttgttaaagaaatggtgcaatatcatt 431

                                                                       
Query: 125 atttgtccttcagagggccatatgtatcatttttttaaaaaaaataacttcatcagtgca 184
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 atttgtccttcagagggccatatgtatcattttttaaaaaaaaataacttcatcagtgca 371

                                                                       
Query: 185 aactatttatttcaaatacttaagttcaaatataaaggcctcccggaaactgaacaagtg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aactatttatttcaaatacttaagttcaaatataaaggcctcccggaaactgaacaagtg 311

                                                                       
Query: 245 caccgtttcctgctaatcacccactgaaatgcttcaaactcattcattaaaagataaaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 caccgtttcctgctaatcacccactgaaatgcttcaaactcattcattaaaagataaaaa 251

                                                                       
Query: 305 gattcatttatacaagctctattacttgatagaaactgtgctggtctttttttttttttt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gattcatttatacaagctctattacttgatagaaactgtgctggtctttttttttttttt 191

              
Query: 365 ttt 367
           |||
Sbjct: 190 ttt 188


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space:   299889
Effective search space used:   299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no383_k01.g1 MSMg01no383_k01.g1 CHROMAT_FILE:
MSMg01no383_k01.g1 PHD_FILE: MSMg01no383_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:43 2005
         (566 letters)



>mm_chr18_79571787_79572752
          Length = 966

 Score = 1071 bits (554), Expect = 0.0
 Identities = 563/566 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagagcttgtgttgttcttttctgcttgttggctcaccagctgagcatgtgggagcaagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagcttgtgttgttcttttctgcttgttggctcaccagctgagcatgtgggagcaagc 260

                                                                       
Query: 61  acagctctctcactacaggctttggtttgaagtttctaagaagtgatgctgccctgacca 120
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 261 acagctctctcactacaggctttggtttgaagtttgtaagaagtgatgctgccctgatca 320

                                                                       
Query: 121 ataccaaaaccctcttttaagtaagcaactgatattttttgaagccaatacacaagaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataccaaaaccctcttttaagtaagcaactgatattttttgaagccaatacacaagaatg 380

                                                                       
Query: 181 taaataagtaaggccatttgtccaggaggcaacgattttatcctagaagcaaaactgaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaataagtaaggccatttgtccaggaggcaacgattttatcctagaagcaaaactgaat 440

                                                                       
Query: 241 aatgaaatgacataaattaatttctaaattttacatggcagtaggaaatacggaatgatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgaaatgacataaattaatttctaaattttacatggcagtaggaaatacggaatgatt 500

                                                                       
Query: 301 ttagaggtcatacaactgtactcatgaacttatgtttttctaataataaacatgaggaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttagaggtcatacaactgtactcatgaacttatgtttttctaataataaacatgaggaaa 560

                                                                       
Query: 361 atacttcatacattttatagatgataatttattatccaagttacagataaatatgttaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atacttcatacattttatagatgataatttattatccaagttacagataaatatgttaaa 620

                                                                       
Query: 421 acatcagaaaatacttaacttcaactgaaaaggacaattcatggtcattaattataagaa 480
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 acatcagaaaatacttaacttcaactgaaaaggacaattcatggacattaattataagaa 680

                                                                       
Query: 481 aaagagaaagatcagtcatataattctaaccaaatgttcagagtttaatagtgatttcac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaagagaaagatcagtcatataattctaaccaaatgttcagagtttaatagtgatttcac 740

                                     
Query: 541 atgtaaagtataccatacttttgaaa 566
           ||||||||||||||||||||||||||
Sbjct: 741 atgtaaagtataccatacttttgaaa 766


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space:   531536
Effective search space used:   531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)