Query= MSMg01no384_i08.b1 MSMg01no384_i08.b1 CHROMAT_FILE:
MSMg01no384_i08.b1 PHD_FILE: MSMg01no384_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:50 2005
(474 letters)
>mm_chr18_51589688_51590561
Length = 874
Score = 652 bits (337), Expect = 0.0
Identities = 358/365 (98%)
Strand = Plus / Minus
Query: 5 gaattctcatgctagtctctaatacaggccttttgtattttgcttttgagttttatttcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gaattctcatgctagtctctaatacaggccttttgtattttgcttttgagttttatttcc 508
Query: 65 aagatctaagtaaagtgttcttataaaaaacaaagaaacaaagggaaaaaaaacccagac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aagatctaagtaaagtgttcttataaaaaacaaagaaacaaagggaaaaaaaacccagac 448
Query: 125 ttttcacacagcatctcattactaccaagtaactggaacaaatgcttcaacctgaagcat 184
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttttcatacagcacctcattactaccaagtaactggaacaaatgcttcaacctgaagcat 388
Query: 185 ttgtaaactttgtaacatgtatttttcaagaagtaactgacctcagcttctctattgtat 244
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 387 ttgtaaactttgtaacatgtacttttcaagaactaactgacctcagcttctctattgtat 328
Query: 245 gggaatctataccagaatcaactgtaagagtaaaatgtaccttaattcctagctgaggtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gggaatctataccagaatcaactgtaagagtaaaatgtaccttaattcctagctgaggtt 268
Query: 305 tgcataattaaactctaaaagaccataacaagtaggtgcaaatgacagttagaaagacaa 364
||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct: 267 tgcataattaaactctaaaagaccataaccagtagttgcaaataacagttagaaagacaa 208
Query: 365 aacaa 369
|||||
Sbjct: 207 aacaa 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_i08.g1 MSMg01no384_i08.g1 CHROMAT_FILE:
MSMg01no384_i08.g1 PHD_FILE: MSMg01no384_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:50 2005
(487 letters)
>mm_chr18_51420612_51421498
Length = 887
Score = 890 bits (460), Expect = 0.0
Identities = 481/490 (98%), Gaps = 4/490 (0%)
Strand = Plus / Plus
Query: 1 atgcccgacccctttggagagaacaagagaacaggatgcaggggaaactatggttagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 atgcccgacccctttggagagaacaagagaacaggatgcaggggaaactatggttagaat 256
Query: 61 gtaaaaataagtaaatcctaaagaagggaggaaggaagg----aaggaaggaaggaagga 116
|||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||
Sbjct: 257 gtaaaaataagtaaatcctaaagaagggaggaagaaaggaaaaaagcaaggaaggaagga 316
Query: 117 aggaaggaaggaaggaaggaaggaaggaaggaaggaagaaaaatggaagcaacctggaga 176
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 317 aggaaggaaggaaggaaggaaggaaggaaggaaggaagaaaaaaggaagcaacctggaga 376
Query: 177 atgaaaggagtatctgtgtggtcgtctctggtgggtttaccttgtaacagttcttcacac 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atgaaaggagtatctgtgtggtcgtctctggtgggtttaccttgtaacagttcttcacac 436
Query: 237 tatagacatgatctctgagaatgacagcctattagcatctattgctgaaatccctggcag 296
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 437 tatagacatgaactctgagaatggcagcctattagcatctattgctgaaatccctggcag 496
Query: 297 tatcatgtgcatttgtcagcttccttgctgtctgtatctcttgtatattgcaggcttctt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tatcatgtgcatttgtcagcttccttgctgtctgtatctcttgtatattgcaggcttctt 556
Query: 357 cactgcacactagcatgtttctaccttaacttctaccacatgttgttttacaaatcattt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cactgcacactagcatgtttctaccttaacttctaccacatgttgttttacaaatcattt 616
Query: 417 ttaatgtctttttctctaagataccgactatagtcaactatcatgccttcattttaattt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttaatgtctttttctctaagataccgactatagtcaactatcatgccttcattttaattt 676
Query: 477 ttcagtacct 486
||||||||||
Sbjct: 677 ttcagtacct 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
