Query= MSMg01no384_p05.b1 MSMg01no384_p05.b1 CHROMAT_FILE:
MSMg01no384_p05.b1 PHD_FILE: MSMg01no384_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:22 2005
(554 letters)
>mm_chr18_76932589_76933542
Length = 954
Score = 980 bits (507), Expect = 0.0
Identities = 540/551 (98%)
Strand = Plus / Plus
Query: 4 ggaattcgtggttcttactctacccatccattccttttcagttgatactattgtattcaa 63
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 204 ggaattcgtggttcttagtctacccatccattccttttcggttgatactattgtattcaa 263
Query: 64 gcattacactgctgagacaaccctcctcccaaactctcactcagctactttggtctctgt 123
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 264 gcattacactgctgagacaaccctcctcccaagctctcactcggctactttggtctctgt 323
Query: 124 tgctgcaataaaaccaacttagagaggaaagggtttatttcagccccaaatccccatgtc 183
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 324 tgctgcaataaaaccaacttagagaggaaaggatttatttcagccccaaatccccatgtc 383
Query: 184 aaaattcattactttggaaagtcaagacataaactcaagcaggaacttggaggtaggaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaaattcattactttggaaagtcaagacataaactcaagcaggaacttggaggtaggaac 443
Query: 244 tgaagcagagcccatggagaaatgctgtgaactggcctgcttccccatggcttgttcacc 303
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 444 tgaagcagagcccatggagaaatgctgtgaactgacctgcttccccatggtttgttcacc 503
Query: 304 ccaagaccatggtggcaccatccacaggtggataggctctctttccatcaattaggaatc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccaagaccatggtggcaccatccacaggtggataggctctctttccatcaattaggaatc 563
Query: 364 aagaaaatgttgtacagacatacccacaagccaatctgatggaggcaattcctcatttgg 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aagaaaatgttgtacagacatacccacaagccaatctgatggaggcaattcctcatttga 623
Query: 424 tgttctttctggatgtatcaaattggcacccaagattagccagataccaaagcctagtgg 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 624 tgttctttctggatgtatcaaattggcacccaagattagccagataccaaagcctagtag 683
Query: 484 aaacacaacgcttagacccaaagctgagagagaatgtttgaaaagcacaaggacatcata 543
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 684 aaacacaacacttagacccaaagctgagagagaatgcttgaaaagcacaaggacatcata 743
Query: 544 gatgagcatgt 554
|||||||||||
Sbjct: 744 gatgagcatgt 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_p05.g1 MSMg01no384_p05.g1 CHROMAT_FILE:
MSMg01no384_p05.g1 PHD_FILE: MSMg01no384_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:22 2005
(317 letters)
>mm_chr18_77092494_77093211
Length = 718
Score = 600 bits (310), Expect = e-176
Identities = 316/318 (99%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 1 ctctgactgggtctttgctttctattcttctgtccattcagcaactccacactctggtgg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 518 ctctgactgggtctttgctttctatccttctgtccattcagcaactccacactctggtgg 459
Query: 61 caccagcagccactgacttctcatctgtcacagtgctttggagcttgacggaattataag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 caccagcagccactgacttctcatctgtcacagtgctttggagcttgacggaattataag 399
Query: 121 gctgacactataa-ttttttttcaagtttcactggaaagagaaatgtgtagtgtaagact 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gctgacactataatttttttttcaagtttcactggaaagagaaatgtgtagtgtaagact 339
Query: 180 aaatattgttattcaaatgattatatgaagagccagtatttcatttccccagcgagtctg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aaatattgttattcaaatgattatatgaagagccagtatttcatttccccagcgagtctg 279
Query: 240 gatggcctgcttgtggtgggtgtggggtggggagacaggccagttgtagatacaaaatag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gatggcctgcttgtggtgggtgtggggtggggagacaggccagttgtagatacaaaatag 219
Query: 300 ttttgcgcaccccccact 317
||||||||||||||||||
Sbjct: 218 ttttgcgcaccccccact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 718
Length adjustment: 9
Effective length of query: 308
Effective length of database: 709
Effective search space: 218372
Effective search space used: 218372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
