ATTACACTTCCTATTTCNAGAGGATCCGCGNAATTCTTTGTTCACTTCTG
AGCCCCATTTTTTAATGNNGTTAATTTGATTTTTANAAAGTCCACCTTTC
TTTGAANTTCTTTTATATATTGTTGGATATTAANTCTTCTATCTTGAATT
AAAAAAATTAAAAAATTTTTGGGTCTGGAGAGTGAGGGGGACTAATAGTA
AGATAAGTAGGTAAAAAAAAAAAATTTTTNNNGNNTTTAATTNNTCAAAA
AAATTCGCCTCTCTATATNNNNNNNCCTAAAAAAATTCTTTCCTTTTTTC
TNTTGATGAGAGATATCAATTAAAAGATGANNNNNCTTNNTTNNGNNNNN
NNNNNTGGTTGGGGGNNAAAAAAAATTNNNANNNANNNNNNNNNNNNCTT
TTTTTNNNTAAAAAAAAAATANNNCCCCCTTATTTTCTNTTTCNTTAAAA
CACCCCCCCCCCCCCCNNNNTTTTTTTTTTTTTNNNNCCCTTTTTAAAAA
CTCTTTNCCCTTTCCNNNCCCCAAAATTTCCCCCCCCCNNCCCCCCCCCC
CCCCCCCCTNTTNTTTCTCTCTCTCCCTTCTTTTCCNNCCCTCCTTTCCC
TCTNNNNNNNNCCCTTTTTTTTTCCCCCCTTTCNCCCTTTTCTTTCCCCC
TTTTTCCTTTTTTCCCCTCTTTTCTTCCCCTCTTCTCCCCCTTTTCCCCC
CCCTCTCCCCCCCCCNCCCCCCCCCCNTTCTTTTCTCCCTTCTTNCCCCC
CTCNCCCNCTCCTCCTCCCCCTTTCNCTCAAAATATATTTATTATTATAA
ATAAAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCAGGACCGCCAGGGATATACAGAGAAACCCTGTCTCGAAA
AACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAA
AACAAAACAAAACAGACTACTTTGCAAACCCACAACCATGTTGGACTTAG
TGAGCATACAGGCAGTATATAATATTATGCTATTACATTAACTAATAGAA
AAAAAATCCCAATCTATCTACTTATTTTAAGTATCCTCATATGAACTGCA
ATTACTAAAGACAAAAGAATCCGTTCGCTCCTTTTTTTGCTTGGTTTTAA
CATTGATGTTCTCATCAACCATCTTGTACCAAGGGAAGACATTAAAGTAT
GGCCATCATTCCATCATTGTGCCTCTAAGAGAAAACATGAAATTAACTAA
CCAAATACTACCAGTATATTTATTGTACAATCTATGTTTGAATGTGGTTA
TTTTAGGGTGTTTAAATTGTGGCATCTGTCTGGCTTATGTCAATAAACAA
AAGCTAAGGAAGCTATGAAATAAAACCATTTACAAAGTCCATTACTTTTT
GACTTGAAGAAATGCCCAATAACCTCCTGGTCCAAGGAATTTCTTGGAAT
ACTTCTTAAAAGGCCTTAATTTGGCCTATGGGTTCAAAGCTTAAAAGGGG
TTTCTTTTTGCTGAATTTTTTTTTTTTTCTACCCCCTCTTTTTTAAACAC
CCCCCTCCTAAAAAATCCCC

Query= MSMg01no385_e13.g1 MSMg01no385_e13.g1 CHROMAT_FILE:
MSMg01no385_e13.g1 PHD_FILE: MSMg01no385_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:49 2005
         (449 letters)



>mm_chr18_50400781_50401628
          Length = 848

 Score =  779 bits (403), Expect = 0.0
 Identities = 431/449 (95%), Gaps = 16/449 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggaccgccagggatatacagagaaaccctgtctcgaaaaacaaaacaaaacaaaacaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 caggaccgccagggatatacagagaaaccctgtctcgaaaaacaaaacaaaacaaaacaa 275

                                                                       
Query: 61  aacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacagactactttgcaaacc 120
           ||||||||||||||||||||||||||| ||              ||||||||||||||||
Sbjct: 276 aacaaaacaaaacaaaacaaaacaaaa-aa--------------gactactttgcaaacc 320

                                                                       
Query: 121 cacaaccatgttggacttagtgagcatacaggcagtatataatattatgctattacatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaaccatgttggacttagtgagcatacaggcagtatataatattatgctattacatta 380

                                                                       
Query: 181 actaatagaaaaaaaatcccaatctatctacttattttaagtatcctcatatgaactgca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actaatagaaaaaaaatcccaatctatctacttattttaagtatcctcatatgaactgca 440

                                                                       
Query: 241 attactaaagacaaaagaatccgttcgctcctttttttgcttggttttaacattgatgtt 300
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 attactaaagacaaaagaatccgttcgctcctttttt-gcttggttttaacattgatgtt 499

                                                                       
Query: 301 ctcatcaaccatcttgtaccaagggaagacattaaagtatggccatcattccatcattgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctcatcaaccatcttgtaccaagggaagacattaaagtatggccatcattccatcattgt 559

                                                                       
Query: 361 gcctctaagagaaaacatgaaattaactaaccaaatactaccagtatatttattgtacaa 420
           ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gcctctaagaggaaacacgaaattaactaaccaaatactaccagtatatttattgtacaa 619

                                        
Query: 421 tctatgtttgaatgtggttattttagggt 449
           |||||||||||||||||||||||||||||
Sbjct: 620 tctatgtttgaatgtggttattttagggt 648


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 848
Length adjustment: 10
Effective length of query: 439
Effective length of database: 838
Effective search space:   367882
Effective search space used:   367882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)