TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGCAGTTGCCTTGAATGGTATTTACCCATTTACTTTCCATATAGGC
ATGTCAATGTAAAAAGAGAGAAATGCCTGAATTACTTAAACATATAAGTG
ACAGTTTAATTGCTCCTTGGTAGTCTCTTTGAAATAATTAATGCTTGTAT
CTTAGCATCTTGGAAAACCTGACAAAGCATTCACTTATTTTAGTTTAAGT
AAAACTGAAAACAAAATATAAACATATTTTAAGAAAGAAAATTTGTATAT
TAGTAAACTATAGAAAGGGTGTAGGCTTTCCTAAAGAGAACAAAAAAAGG
GTAGCTAAACTGAAAATAATGCCCAAATTCATATTTAGCCATGTATGTAT
AAAGTTATATTCAAGGCAGTCAGTGTAAAATAAAATTTAAAAAATTTAAT
AACAAGTACTATATGTTTACAATTATATGAAATTATAAGCAAAATCTGGA
GAGAATAGAAGTTTCAGACTAGGTTCTACATTGCCATACTCTGGAAATTT
TCCTGTGTATGATTTTGTCCTCAGATTTCATGTTAATGAAACCATAAATA
CTTATTGCTTACTGCATACTCTTGTGATTACAAGTTATAGTGTACTTTTA
AACGAAATAGTGGAGAATGCTTCTAGAAGGGATTGCAGAATAACAAAATA
TGACTAAGAA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATTTTCTGCATTCTGTATGCTGACT
ACTTAGGGTCACTGTTCCTAACTTTGTACTTTCCTGGGACATATGATCAC
ATGGTATTCAAATTATCTATTCAAAGTTTGCCACAAGATTAAACAAATAT
TTAAATCATAAATTGAACAGGAAGTTTACAACATACATATTTACATGTAT
TTCCATTAAGAAAAGTTATCTAGTCATTTATTATTTGTCAGTAGCTCCAC
AGACTCATTGAAAGTATAAGATTATAATTCTTACATCTCAGTTAACATTG
AAGTTGTGTATAAATAAACCCAGGCAATATTGTATCTTTTCTCTTTGCAC
CTACAATAAGTCATCTGTTCATTTTACAAATTTTAGTTATTTGTTTTATG
GCCTAAATACTGTATTTCTAAATAATAAATATGTATGTCTGGTTTCCTTC
TTGTGCAATTAGCTTATGACATATGAAAAATTGCAGAGTCCCAGCTGTGG
TTTTCATAATAGAGACAGCAAATTGCAGTCCTTATTATAAGTGGCTCAGT
AATTTCTAGTAAAATTTTAGGAATTCTTATAAAATCATCATTAAGAATTA
AGAAATAATTTATATGTCTGTATAGCATCACTACAAGACAATACATCTTT
ATTGGTCTGCAGAAAATCTAA

Query= MSMg01no386_n02.b1 MSMg01no386_n02.b1 CHROMAT_FILE:
MSMg01no386_n02.b1 PHD_FILE: MSMg01no386_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:42 2005
         (641 letters)



>mm_chr18_18518836_18519876
          Length = 1041

 Score = 1208 bits (625), Expect = 0.0
 Identities = 637/641 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggtatttacccatttactttccatataggcatgtcaatgtaaaaagagagaaatgcctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtatttacccatttactttccatataggcatgtcaatgtaaaaagagagaaatgcctg 260

                                                                       
Query: 61  aattacttaaacatataagtgacagtttaattgctccttggtagtctctttgaaataatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattacttaaacatataagtgacagtttaattgctccttggtagtctctttgaaataatt 320

                                                                       
Query: 121 aatgcttgtatcttagcatcttggaaaacctgacaaagcattcacttattttagtttaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgcttgtatcttagcatcttggaaaacctgacaaagcattcacttattttagtttaag 380

                                                                       
Query: 181 taaaactgaaaacaaaatataaacatattttaagaaagaaaatttgtatattagtaaact 240
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaactgaaaacaaaatataaacgtattttaagaaagaaaatttgtatattagtaaact 440

                                                                       
Query: 241 atagaaagggtgtaggctttcctaaagagaacaaaaaaagggtagctaaactgaaaataa 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atagaaagggcgtaggctttcctaaagagaacaaaaaaagggtagctaaactgaaaataa 500

                                                                       
Query: 301 tgcccaaattcatatttagccatgtatgtataaagttatattcaaggcagtcagtgtaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcccaaattcatatttagccatgtatgtataaagttatattcaaggcagtcagtgtaaa 560

                                                                       
Query: 361 ataaaatttaaaaaatttaataacaagtactatatgtttacaattatatgaaattataag 420
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataaaattaaaaaaatttaataacaagtactatatgtttacaattatatgaaattataag 620

                                                                       
Query: 421 caaaatctggagagaatagaagtttcagactaggttctacattgccatactctggaaatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaaatctggagagaatagaagtttcagactaggttctacattgccatactctggaaatt 680

                                                                       
Query: 481 ttcctgtgtatgattttgtcctcagatttcatgttaatgaaaccataaatacttattgct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttcctgtgtatgattttgtcctcagatttcatgttaatgaaaccataaatacttattgct 740

                                                                       
Query: 541 tactgcatactcttgtgattacaagttatagtgtacttttaaacgaaatagtggagaatg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 741 tactgcatactcttgtgattacaagttatagtgtacttttaaacgaaatagcggagaatg 800

                                                    
Query: 601 cttctagaagggattgcagaataacaaaatatgactaagaa 641
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cttctagaagggattgcagaataacaaaatatgactaagaa 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)