Query= MSMg01no387_b19.b1 MSMg01no387_b19.b1 CHROMAT_FILE:
MSMg01no387_b19.b1 PHD_FILE: MSMg01no387_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:04 2005
(430 letters)
>mm_chr18_47433884_47434714
Length = 831
Score = 781 bits (404), Expect = 0.0
Identities = 422/428 (98%), Gaps = 1/428 (0%)
Strand = Plus / Minus
Query: 4 ggaattccttgaa-atataattaaactccggggtgctctttctggacagaaatcactctg 62
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 631 ggaattccttgaacatataattaaactccgggatgctctttctggacagaaatcactctg 572
Query: 63 caggcaagtttggagctttcatttcctcctcaaaggacaggcatttattaatttttccat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 caggcaagtttggagctttcatttcctcctcaaaggacaggcatttattaatttttccat 512
Query: 123 acgttaatggggatatgttacaattaaagcttgaaaggacaatgcccagttcttgtgagc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 acgttaatggggatatgttacaattaaagcttgaaaggacaatgcccagttcttgtgagc 452
Query: 183 tcttgatctggagtttctggaaggaaatcagagaagaacggggcttcccctttagctcat 242
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 451 tcttgatctggagtttctggaaggaaatcagagaagaatggggcttcccctttagctcat 392
Query: 243 aaccctgtccactgcaggtaggaactattcagcccacagtagttagatggcaaaaattta 302
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 391 aaccctgtccactgcaggtaggaactattcaacccgcagtagttagatggcaaaaattta 332
Query: 303 ccatcaaaatcagtgatgggctaccacagaggtcaggaaattactaaagagccttagaaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ccatcaaaatcagtgatgggctaccacagaggtcaggaaattactaaagagccttagaaa 272
Query: 363 gatactttcaaaggagggaaaacataatatatttttaaggggaaaaagagagagagagag 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gatactttcaaaggagggaaaacataatatatttttaaggggaaaaagagagagagagat 212
Query: 423 atgctgta 430
||||||||
Sbjct: 211 atgctgta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 831
Length adjustment: 9
Effective length of query: 421
Effective length of database: 822
Effective search space: 346062
Effective search space used: 346062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_b19.g1 MSMg01no387_b19.g1 CHROMAT_FILE:
MSMg01no387_b19.g1 PHD_FILE: MSMg01no387_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:04 2005
(375 letters)
>mm_chr18_47266421_47267196
Length = 776
Score = 712 bits (368), Expect = 0.0
Identities = 374/376 (99%), Gaps = 1/376 (0%)
Strand = Plus / Plus
Query: 1 ttcattgagccttgtttattaatgaggctactgttaaactttcaaaaaacttgagaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcattgagccttgtttattaatgaggctactgttaaactttcaaaaaacttgagaatct 260
Query: 61 tttaaaatcccaagtattctaaaaaaaaaa-tcccttcaaggattcagaatatattaatt 119
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 tttaaaatcccaagtattctaaaaaaaaaaatcccttcaaggattcagaatatattaatt 320
Query: 120 tcccttttctcataattactttttaaaggtttgtttattttattttatttaatgagggtt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcccttttctcataattactttttaaaggtttgtttattttattttatttaatgagggtt 380
Query: 180 ttgcctgtattggcaccctgtgggttcctagtgtctgcagaagaggcctctggaattaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgcctgtattggcaccctgtgggttcctagtgtctgcagaagaggcctctggaattaag 440
Query: 240 agttatggttggttgctaggaactgtatccggcttgtctgtaagggcagccagtgctctt 299
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 agttatggttggttgctaggaactgtatctggcttgtctgtaagggcagccagtgctctt 500
Query: 300 acccactgagccatccctccagcctctagttttatagttcctaagtttgtagaacacaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acccactgagccatccctccagcctctagttttatagttcctaagtttgtagaacacaaa 560
Query: 360 gttgtctgctttggaa 375
||||||||||||||||
Sbjct: 561 gttgtctgctttggaa 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 776
Length adjustment: 9
Effective length of query: 366
Effective length of database: 767
Effective search space: 280722
Effective search space used: 280722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
