Query= MSMg01no388_i01.b1 MSMg01no388_i01.b1 CHROMAT_FILE:
MSMg01no388_i01.b1 PHD_FILE: MSMg01no388_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:51 2005
(213 letters)
>mm_chr4_103371128_103371742
Length = 615
Score = 373 bits (193), Expect = e-108
Identities = 209/215 (97%), Gaps = 2/215 (0%)
Strand = Plus / Minus
Query: 1 cctctgtttaaaggtccctgacattgggcagtgtgaagaacta--agagaggctgctgcc 58
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 415 cctctgtttaaaggtccctgacattgggcagtgtgaagaactaagagagaggctgctgcc 356
Query: 59 aaggacttaggacagcatctggcttactttaaggagtcagtatttcctagagcacatgat 118
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 355 aaggacttaggacagcatctggcttactttaaggagtcagtatttcctagaacacatgaa 296
Query: 119 atgaatggcatcaaattcatccatatccaaagtctgaaagaagtcatggagagcatatat 178
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 295 atgaatggcatcaaattcatccatatccaaagtctgaaagaagccatggagagcatatat 236
Query: 179 cgcgttgttctggtttaacaagattcaggaatagc 213
||||||||||||||| |||||||||||||||||||
Sbjct: 235 cgcgttgttctggttaaacaagattcaggaatagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 615
Length adjustment: 9
Effective length of query: 204
Effective length of database: 606
Effective search space: 123624
Effective search space used: 123624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no388_i01.g1 MSMg01no388_i01.g1 CHROMAT_FILE:
MSMg01no388_i01.g1 PHD_FILE: MSMg01no388_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:51 2005
(553 letters)
>mm_chr18_33794251_33795203
Length = 953
Score = 611 bits (316), Expect = e-179
Identities = 325/328 (99%)
Strand = Plus / Plus
Query: 1 tgtaatcaagactaattattcttaacaacaacaacatattgggttttggccagtgaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtaatcaagactaattattcttaacaacaacaacatattgggttttggccagtgaagaa 260
Query: 61 agcagacagaatgaatatcaaagtggagcccaggactaaccagctccaggcaacccagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcagacagaatgaatatcaaagtggagcccaggactaaccagctccaggcaacccagca 320
Query: 121 tcctgttggggatggtcggaggccatgcccagagaatctgtgccaagcgagtcaactgcc 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 tcctgttggggatggtcggaggccatgcccagagattctgtgccaagcgagtcaactgcc 380
Query: 181 tgcatatcaacatgccatcctttagggagaagaaatagttacaatttaatctctcaggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcatatcaacatgccatcctttagggagaagaaatagttacaatttaatctctcaggaa 440
Query: 241 aagcatgttacagggaaaaggagaatctcaaaaagaggatgaatttcattcattttatta 300
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 aagcatgtcacagggaaaaggagaatctcaaaaaggggatgaatttcattcattttatta 500
Query: 301 atggcaatttgtctttaagaaattagcc 328
||||||||||||||||||||||||||||
Sbjct: 501 atggcaatttgtctttaagaaattagcc 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
