Query= MSMg01no391_m05.b1 MSMg01no391_m05.b1 CHROMAT_FILE:
MSMg01no391_m05.b1 PHD_FILE: MSMg01no391_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:05 2005
(346 letters)
>mm_chr18_65260053_65260798
Length = 746
Score = 630 bits (326), Expect = 0.0
Identities = 341/346 (98%), Gaps = 2/346 (0%)
Strand = Plus / Minus
Query: 1 agagaagggtgagcaaagcgtgatgtctttgctcatctatgctgtcttcagctccttacg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 agagaagggtgagcaaagcgtgatgtctttgctcatctatgctgtcttcagctccttaca 654
Query: 61 agacagcatcatgtggtaccccaagctccctcaaaacttttaatgtagccaagaatgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 agacagcatcatgtggtaccccaagctccctcaaaacttttaatgtagccaagaatgact 594
Query: 121 ctgaacatctcattctctagcccctacctctcatataccaggattacatgaattcatcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ctgaacatctcattctctagcccctacctctcatataccaggattacatgaattcatcag 534
Query: 181 tgtatggtgg-tgggaccaagggcttcaatgggtactgagctacatcctagtctattgtt 239
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tgtatgg-ggttgggaccaagggcttcaatgggtactgagctacatcctagtctattgtt 475
Query: 240 ctattttgaatttcttaaggtgccatagatgtaatctgtaactatggtcttctggctata 299
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ctattttgaatttcagaaggtgccatagatgtaatctgtaactatggtcttctggctata 415
Query: 300 tcaagagcatacagggaaggccaggaaggccttcccggaggaaaga 345
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tcaagagcatacagggaaggccaggaaggccttcccggaggaaaga 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_m05.g1 MSMg01no391_m05.g1 CHROMAT_FILE:
MSMg01no391_m05.g1 PHD_FILE: MSMg01no391_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:05 2005
(221 letters)
>mm_chr18_65078855_65079476
Length = 622
Score = 398 bits (206), Expect = e-115
Identities = 218/222 (98%), Gaps = 1/222 (0%)
Strand = Plus / Plus
Query: 1 cttgagcccagagttttagtcccttacttttttggtttgttctgctacatcagaagggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgagcccagagttttagtcccttacttttttggtttgttctgctacatcagaagggac 260
Query: 61 cgggggatcacatgacccatgtggtttaagtgtaacccaggctttgagttggctgccgtg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 cgggggatcacatgacccatgtggtttaagtgtaacccaggctttgagttggctgccgag 320
Query: 121 acttttttcctcttttctactgagaaaagcatttcttaatccaaagcaattaattagtgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttttttcctcttttctactgagaaaagcatttcttaatccaaagcaattaattagtgg 380
Query: 181 tgggataatcttaaaacttcatcacatgtttttttt-ggggg 221
||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 agggataatcttaaaacttcatcacatgtttttttttggggg 422
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 622
Length adjustment: 9
Effective length of query: 212
Effective length of database: 613
Effective search space: 129956
Effective search space used: 129956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
