Query= MSMg01no393_p08.b1 MSMg01no393_p08.b1 CHROMAT_FILE:
MSMg01no393_p08.b1 PHD_FILE: MSMg01no393_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:09 2005
(464 letters)
>mm_chr18_26475198_26476061
Length = 864
Score = 712 bits (368), Expect = 0.0
Identities = 371/372 (99%)
Strand = Plus / Minus
Query: 93 ctcttaacctgtaatccagggccaattaaatgttgtcttttataaggaaaataaaggtat 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 ctcttaacctgtaatccagggccaattaaatgttgtcttttataaggaaaataaaggtat 803
Query: 153 gtcttcctaccccaaagatctggattagaaatggatctttttatttcaaattaagtaaaa 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gtcttcctaccccaaagatctggattagaaatggatctttttatttcaaattaagtaaaa 743
Query: 213 agacctcagcacactgcccctccattctgggttataggtaatttcatatatagtcaagtt 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 agacctcagcacactgcccctccattctgggttataggtaatttcatatatagtcaagtt 683
Query: 273 gacaaccaagagtaaccaaaaaatgtgattatttcatgagtgaaaatttttacttacccc 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gacaaccaagagtaaccaaaaaatgtgattatttcatgagtgaaaatttttacttacccc 623
Query: 333 attatttattcattaattacttattccttctcacgtatcaaccatacctcaaagttggat 392
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 622 attatttattcattaattacttattccttctcacgtatcaagcatacctcaaagttggat 563
Query: 393 taaaaattagacttttgttctcagttgtaagaaagaaacaaatattttcataggttttgc 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 taaaaattagacttttgttctcagttgtaagaaagaaacaaatattttcataggttttgc 503
Query: 453 tgcttatggatc 464
||||||||||||
Sbjct: 502 tgcttatggatc 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_p08.g1 MSMg01no393_p08.g1 CHROMAT_FILE:
MSMg01no393_p08.g1 PHD_FILE: MSMg01no393_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:09 2005
(508 letters)
>mm_chr18_26281386_26282294
Length = 909
Score = 949 bits (491), Expect = 0.0
Identities = 504/509 (99%), Gaps = 3/509 (0%)
Strand = Plus / Plus
Query: 1 cacagaatcagaaagaagagtgtgtactctgcttttcagtctctgttcaattccctgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacagaatcagaaagaagagtgtgtactctgcttttcagtctctgttcaattccctgggt 260
Query: 61 cccttacacttgtcctcagagctctc--attggactgtggcctcttgaagtgtgtgggtt 118
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 cccttacacttgtcctcagagctctctcattggactgtggcctcttgaagtgtgtgggtt 320
Query: 119 tatcagtactacccatgaattccagagtcccctgtgattcatattttcttttcacatctt 178
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 tatcagtactacccatgaattccagagttccctgtgattcatattttcttttcacatctt 380
Query: 179 tatctcaatgttaaagatctttcctgagacattagagcacatgctctaattgttccttgt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatctcaatgttaaagatctttcctgagacattagagcacatgctctaattgttccttgt 440
Query: 239 ttattaccaggagggccaagcattcaagcgtccgaaattagtaggactttacaaggtaga 298
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 ttattaccaggagggccaagcattcaagtgtccgaaattagtaggactttacaaggtaga 500
Query: 299 agctgaagagaaagaattccaaggacaaaggagggaatggagagatacacagagaagata 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agctgaagagaaagaattccaaggacaaaggagggaatggagagatacacagagaagata 560
Query: 359 acagattccatgacagtgggtcctctgactactacaaggttaaatattctagattttact 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acagattccatgacagtgggtcctctgactactacaaggttaaatattctagattttact 620
Query: 419 gctctgtacagttgagaggtagaatttctttgagtatttaactatagatagcagtcattt 478
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctctgtacagttgagaggtagaatttctttgagtatttaactatagatagcagtcatt- 679
Query: 479 attggggaaactggaaaattcacctctta 507
|||||||||||||||||||||||||||||
Sbjct: 680 attggggaaactggaaaattcacctctta 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 909
Length adjustment: 10
Effective length of query: 498
Effective length of database: 899
Effective search space: 447702
Effective search space used: 447702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
