Query= MSMg01no394_n09.b1 MSMg01no394_n09.b1 CHROMAT_FILE:
MSMg01no394_n09.b1 PHD_FILE: MSMg01no394_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:40:22 2005
(249 letters)
>mm_chr18_39756364_39757013
Length = 650
Score = 447 bits (231), Expect = e-130
Identities = 243/247 (98%), Gaps = 1/247 (0%)
Strand = Plus / Minus
Query: 1 gaatatgtttttttgttgagactaatgaaattttggtcttggttgattaaagtcctatca 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gaatatgcttttttgttgagactaatgaaattttggtcttggttgattaaagtcctatca 388
Query: 61 tttttctttccttcgggtagttaatgcatggacacactcataagtctctgtcatactagc 120
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 387 tttttctttccttcaggtagttaatgcacggacacactcataagtctctgtcatactagc 328
Query: 121 ctatctcttccagttgaagtagg-tttttttttatcaccctactatttgatttgtggttt 179
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctatctcttccagttgaagtaggttttttttttatcaccctactatttgatttgtggttt 268
Query: 180 ttggatgcataatgttaaacaaattggcctattattgtccttcacaagtaatcctttatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttggatgcataatgttaaacaaattggcctattattgtccttcacaagtaatcctttatc 208
Query: 240 taatttt 246
|||||||
Sbjct: 207 taatttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 650
Length adjustment: 9
Effective length of query: 240
Effective length of database: 641
Effective search space: 153840
Effective search space used: 153840
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no394_n09.g1 MSMg01no394_n09.g1 CHROMAT_FILE:
MSMg01no394_n09.g1 PHD_FILE: MSMg01no394_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:40:22 2005
(241 letters)
>mm_chr18_39582191_39582831
Length = 641
Score = 451 bits (233), Expect = e-131
Identities = 239/241 (99%)
Strand = Plus / Plus
Query: 1 ctttaatttttttcttcgtttttcgagctgtgaatattgaaaaaagaaaaaaatatacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttaatttttttcttcgtttttcgagctgtgaatattgaaaaaagaaaaaaatatacga 260
Query: 61 aatcaactttgtagcctaaactttcaagttataagaggtctttaatttctgacactatta 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatcaactttgtagcctatactttcaagttataagaggtctttaatttctgacactatta 320
Query: 121 ttgaaagaagtaaactatttaaaacttttggcatgtctatgtgaatctgtgtgtacatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgaaagaagtaaactatttaaaacttttggcatgtctatgtgaatctgtgtgtacatgt 380
Query: 181 gtgagtgtggtgtatgtacacgtgcatctgcacacatctgtgcatgactcaaggccaggg 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 gtgagtgtggtgtatgtacacgtgcatatgcacacatctgtgcatgactcaaggccaggg 440
Query: 241 g 241
|
Sbjct: 441 g 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
