Query= MSMg01no399_d21.b1 MSMg01no399_d21.b1 CHROMAT_FILE:
MSMg01no399_d21.b1 PHD_FILE: MSMg01no399_d21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:12 2005
(457 letters)
>mm_chr18_24100723_24101574
Length = 852
Score = 770 bits (398), Expect = 0.0
Identities = 441/458 (96%), Gaps = 7/458 (1%)
Strand = Plus / Minus
Query: 1 atttatatagccacagaatcagtaagttcaccaacttaaatatatttgttggtttttgta 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 652 atttatatagccacagaatcagtaagttcaccaacttatatatatttgttggtttttgta 593
Query: 61 gctgtttgattttattcactagttatctatgttagtaggtaaagggttagccttgaagta 120
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gctgtttgattttatttagtagttatctatgttagtaggtaaagggttagccttgaagta 533
Query: 121 tacctcatgctaatcatgtataagtgggttgaaaggtcattaagtgtgtagatgtaaagt 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 532 tacctcatgctaatcatgtataagtgggttgaaaggtcattaaatgtgtagatgtaaagt 473
Query: 181 gatccaggttttttgagcatctcccccatccccaccctcacccccaggtcctcttgtttt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 472 gatccaggttttttgagcatctcccccatccccaccctcacccccaggtcctcttgttct 413
Query: 241 ttcctctctttctcctcccctccctgcccagagtgaggatgttgctgtatcacatcttta 300
||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 412 ttcctctctttctcctcccctccctgcccagagtgaggatgttgctggatcat-tcttta 354
Query: 301 tgaattagcaaacaggcgataattggtagcagtggatccagctgccgattggttggatcc 360
|||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 353 tgaattagcaaaca-----taattggtagcagtggatccagctgttgattggttggatcc 299
Query: 361 aattcccatctctgctgctttgaaaacagtctgctggagccagctctttgtttaccacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aattcccatctctgctgctttgaaaacagtctgctggagccagctctttgtttaccacac 239
Query: 421 tttacagaggcagggagtta-ggggcctttctgaaaac 457
||||||||| |||||||||| |||||||||||||||||
Sbjct: 238 tttacagagacagggagttaaggggcctttctgaaaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 852
Length adjustment: 10
Effective length of query: 447
Effective length of database: 842
Effective search space: 376374
Effective search space used: 376374
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_d21.g1 MSMg01no399_d21.g1 CHROMAT_FILE:
MSMg01no399_d21.g1 PHD_FILE: MSMg01no399_d21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:12 2005
(326 letters)
>mm_chr18_23926796_23927521
Length = 726
Score = 600 bits (310), Expect = e-176
Identities = 322/326 (98%)
Strand = Plus / Plus
Query: 1 agagggattactgctcaatgtgaacttcagagaatatagaatcgttaaaatgcatgaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagggattactgctcaatgtgaacttcagagaatatagaatcgttaaaatgcatgaagt 260
Query: 61 atcaaactggtgtttagaactcgctttcagctttcactgtatgcctttgtatcaatgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcaaactggtgtttagaactcgctttcagctttcactgtatgcctttgtatcaatgttt 320
Query: 121 agaagaactggacagagtggaggctagagagactaagagtactaagaagcagagactaag 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 agaagaactggacagagtggaggctagagagactaagagtactaagacgcagagactaag 380
Query: 181 agtacttgttgttcttacagaggacctagatcgagttctcatcatcctcgccatggctca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 agtacttgttgttcttacagaggacctagatcgagttctcatcatcctcgccgtggctca 440
Query: 241 ctactctttgtaactccagttctggtagacccaagacccttttctgaccttcatgcgaac 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 441 ctactctttgtaactccagttctgggagacccaagacccttttctgaccttcatgggaac 500
Query: 301 tagggattcctgtgcttcacaaacat 326
||||||||||||||||||||||||||
Sbjct: 501 tagggattcctgtgcttcacaaacat 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
