Query= MSMg01no401_a02.b1 MSMg01no401_a02.b1 CHROMAT_FILE:
MSMg01no401_a02.b1 PHD_FILE: MSMg01no401_a02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:31 2005
(248 letters)
>mm_chr18_47086260_47086905
Length = 646
Score = 414 bits (214), Expect = e-120
Identities = 238/248 (95%), Gaps = 6/248 (2%)
Strand = Plus / Plus
Query: 1 tttacagtgagtagaaccaagaacagcagcaggctcatctgctgtgctcattcctcgttt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 tttacagtgagtagaaccaagaacagcagcaggctcatctgctgtgttcattcctcgttt 260
Query: 61 cttgatacggaagcgaacaggaattgagagtgctgggttttacacttttcatagctatac 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgatatggaagcgaacaggaattgagagtgctgggttttacacttttcatagctatac 320
Query: 121 atacccaagtgtagagctgttgcatagggtaggtctggaaaacaaactaatgtaccccca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 atacccaagtgtagagctgttgcatagggtaggtctggaaaacaaactaatgtacccc-a 379
Query: 181 t--cttgatgcaactttacagaaatgctggtattattctagataggcacctggactacta 238
| | ||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 380 ttacatga---aactttacagaaatgctgatattattctagataggcacctggactacta 436
Query: 239 ttaaactc 246
||||||||
Sbjct: 437 ttaaactc 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 646
Length adjustment: 9
Effective length of query: 239
Effective length of database: 637
Effective search space: 152243
Effective search space used: 152243
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no401_a02.g1 MSMg01no401_a02.g1 CHROMAT_FILE:
MSMg01no401_a02.g1 PHD_FILE: MSMg01no401_a02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:31 2005
(179 letters)
>mm_chr18_47287851_47288429
Length = 579
Score = 290 bits (150), Expect = 3e-83
Identities = 171/178 (96%)
Strand = Plus / Minus
Query: 1 attcactgcgcctttcagatctgtagatttaagtttttttgtttttgtttttttgttttt 60
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 attcactgagtctttcagatctgtagatttaagtttttttgtttttgtttttttgttttt 385
Query: 61 atttttttgtcaaattcaacaaatttctggctaatgtttcccataataacgtttttgctc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atttctttgtcaaattcaacaaatttctggctaatgtttcccataataacgtttttgctc 325
Query: 121 caactcactgtcctgggatcacaggtctgcacatgcttgctgatttaatgctattcca 178
|| || |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 324 cagcttgctgtcctgggatcacaggtccgcacatgcttgctgatttaatgctattcca 267
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
