Query= MSMg01no402_b08.b1 MSMg01no402_b08.b1 CHROMAT_FILE:
MSMg01no402_b08.b1 PHD_FILE: MSMg01no402_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:52 2005
(564 letters)
>mm_chr18_66922023_66922982
Length = 960
Score = 988 bits (511), Expect = 0.0
Identities = 532/541 (98%), Gaps = 6/541 (1%)
Strand = Plus / Minus
Query: 25 tatgaggctctctgttac-caatgacaggaaatcatccctaattggtgtgggggaaaaaa 83
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 760 tatgaggctctctgttacacaatgacaggaaatcatccctaattggtgtggggg--aaaa 703
Query: 84 aaatgagaagcacataaagcaatatgcttagggtaccaaagagatgatcacacgaagaat 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aaatgagaagcacataaagcaatatgcttagggtaccaaagagatgatcacacgaagaat 643
Query: 144 tgagtgtcagagaccagaaatctttgccgccccccaaaatgagtcatttaaaagataaat 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tgagtgtcagagaccagaaatctttgccgccccccaaaatgagtcatttaaaagataaat 583
Query: 204 gataatattcttgctcagaagacagacaccttgaaaaggtcagagattcggtacattcca 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gataatattcttgctcagaagacagacaccttgaaaaggtcagagattcggtacattcca 523
Query: 264 gtggatgattgtcttttaaaatgatagatccaaaatgcttttaataaaggctcagccttt 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gtggatgattgtcttttaaaatgatagatccaaaatgcttttaataaaggctcagccttt 463
Query: 324 ttctttttctttttgtcctagagacagcaaaatttaaaacatgcaaaaaaaaaaaaaagt 383
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 462 ttctttttctttttgtcctagagacagcaaaatttaaaacatgc---aaaaaaaaaaagt 406
Query: 384 gtcccaagggagcagagcaatgttaccatttagtgcctggggctaccgcagtcccatcag 443
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 405 gtcccaagggagcagagcaatgttaccatttagtgcctggggccaccgcagtcccatcag 346
Query: 444 ggaatagagagaataattttcccaataccaaaaagccagtggttgccactcacaaaagca 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ggaatagagagaataattttcccaataccaaaaagccagtggttgccactcacaaaagca 286
Query: 504 ggcactataaggagattctacatatgtgccagaacacagctggtgccctgctcatcataa 563
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 285 ggcaatataaggagattctacacatgtgccagaacacagctggtgccctgctcatcataa 226
Query: 564 a 564
|
Sbjct: 225 a 225
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 960
Length adjustment: 10
Effective length of query: 554
Effective length of database: 950
Effective search space: 526300
Effective search space used: 526300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no402_b08.g1 MSMg01no402_b08.g1 CHROMAT_FILE:
MSMg01no402_b08.g1 PHD_FILE: MSMg01no402_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:52 2005
(329 letters)
>mm_chr18_66772816_66773544
Length = 729
Score = 590 bits (305), Expect = e-173
Identities = 320/325 (98%)
Strand = Plus / Plus
Query: 1 ctgtcccttttcaaaacgaagacaatggatgggggtgagatgcaacagttcagaagcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtcccttttcaaaacgaagacaatggatgggggtgagatgcaacagttcagaagcctg 260
Query: 61 tctctgcaggaagaagagactgagaaaatgatccgaaaggaaggaggctttgacggtggt 120
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 261 tctctgcaggaagaagagactgagaaaatgatcccaaaggaaggagactttgacggtggt 320
Query: 121 gaaggacgatgaaggttatcggagtccacggtgtggacagttccttcctgcgctactctc 180
||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 gaaggacgacaaaggttatcggagtccacagtgtggacagttccttcctgcgctactctc 380
Query: 181 ggaaagtcaatgctttactaaaactttgtttctggcctgtgtttggggattcactatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaaagtcaatgctttactaaaactttgtttctggcctgtgtttggggattcactatttt 440
Query: 241 tgtggccaatcctggtctctctctttggaagtttctatttcctcttggctgcctctgtcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtggccaatcctggtctctctctttggaagtttctatttcctcttggctgcctctgtcc 500
Query: 301 tctgaagttgagttatgggaaaaac 325
|||||||||||||||||||||||||
Sbjct: 501 tctgaagttgagttatgggaaaaac 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
