Query= MSMg01no403_l01.b1 MSMg01no403_l01.b1 CHROMAT_FILE:
MSMg01no403_l01.b1 PHD_FILE: MSMg01no403_l01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:04 2005
(192 letters)
>mm_chr18_85737038_85737629
Length = 592
Score = 339 bits (175), Expect = 9e-98
Identities = 185/191 (96%), Gaps = 6/191 (3%)
Strand = Plus / Minus
Query: 5 gaattcataaatttcc---atttcactcagctgagctattcatacaacactgcccaaccc 61
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gaattcataaat---caaaatttcactcagctgagctattcatacaacactgcccaaccc 352
Query: 62 aagctctaagcatcacagtgttggaattctactcttgagccatagtagttttgctgaagg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aagctctaagcatcacagtgttggaattctactcttgagccatagtagttttgctgaagg 292
Query: 122 tttcacacgttcccttttaattaattatatgcttatgcatttatacaccacagaaagaat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tttcacacgttcccttttaattaattatatgcttatgcatttatacaccacagaaagaat 232
Query: 182 ggaagagggga 192
|||||||||||
Sbjct: 231 ggaagagggga 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 592
Length adjustment: 8
Effective length of query: 184
Effective length of database: 584
Effective search space: 107456
Effective search space used: 107456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no403_l01.g1 MSMg01no403_l01.g1 CHROMAT_FILE:
MSMg01no403_l01.g1 PHD_FILE: MSMg01no403_l01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:04 2005
(312 letters)
>mm_chr18_85543641_85544352
Length = 712
Score = 603 bits (312), Expect = e-177
Identities = 312/312 (100%)
Strand = Plus / Plus
Query: 1 catacttaaattcaggatacaaggtacaaatcactcagacagaacatttattttttagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catacttaaattcaggatacaaggtacaaatcactcagacagaacatttattttttagag 260
Query: 61 gaataagggaaattcttccactaagtcataatttattgaagacacggggaaaggcagggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaataagggaaattcttccactaagtcataatttattgaagacacggggaaaggcagggg 320
Query: 121 agaggaagcccgactacaggtggagagccacgagtcacacggattgtcattctttgaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaggaagcccgactacaggtggagagccacgagtcacacggattgtcattctttgaagg 380
Query: 181 tcagtagagggcacaggtttccctttctaggagggacggcaacagaagtgttttcttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagtagagggcacaggtttccctttctaggagggacggcaacagaagtgttttcttaat 440
Query: 241 tacagcaactttcacttttatacaactttataatatctgtcttagatttgttttctcacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacagcaactttcacttttatacaactttataatatctgtcttagatttgttttctcacc 500
Query: 301 caaaatagtcat 312
||||||||||||
Sbjct: 501 caaaatagtcat 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
