Query= MSMg01no404_b14.b1 MSMg01no404_b14.b1 CHROMAT_FILE:
MSMg01no404_b14.b1 PHD_FILE: MSMg01no404_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:38 2005
(482 letters)
>mm_chr18_50274298_50275178
Length = 881
Score = 876 bits (453), Expect = 0.0
Identities = 471/479 (98%), Gaps = 5/479 (1%)
Strand = Plus / Plus
Query: 5 gaattcactatgttttcgggctacctattctaggtcttatcctaaagtaataggtcttga 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactatgttttggggctacctattctaggtcttatcctaaagtaataggtcttga 264
Query: 65 caccaaataagcttaccaggaaccccattcaatagtcattattttctagtaaaataatga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caccaaataagcttaccaggaaccccattcaatagtcattattttctagtaaaataatga 324
Query: 125 tcagaaaaaaattgccagatttttgaaatcttgctaagcttctcgtgtttttcaggatgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcagaaaaaaattgccagatttttgaaatcttgctaagcttctcgtgtttttcaggatgg 384
Query: 185 tccgggcatcttctaagtccttactttctagagagagtcagaggagggctgcataagagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccgggcatcttctaagtccttactttctagagagagtcagaggagggctgcataagagg 444
Query: 245 aaacagtatataaaataaaaatggaaagagcattt--atattcagaaatacatgaacagg 302
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 445 aaacagtatataaaatgaaaatggaaagagca---ggatattcagaaatacatgaacagg 501
Query: 303 aggacattttatctatctcagaaactagaggacaagtcggaaagatatcagtgggaactt 362
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 502 aggacattttatctatctcagaaactagaggacaagtaggaaagatatcagtgggaactt 561
Query: 363 agacgaagggaataatatgatctaatggccatatgtagagcccaagcccaggcaacaaag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agacgaagggaataatatgatctaatggccatatgtagagcccaagcccaggcaacaaag 621
Query: 423 cacacattcttgtcaagtacatgtggaaaccttattaatactggcaaaatgatgactca 481
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cacacattcttgtcaagtacatgtggaaaccttattaatactggcaaaatgatgactca 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 881
Length adjustment: 10
Effective length of query: 472
Effective length of database: 871
Effective search space: 411112
Effective search space used: 411112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_b14.g1 MSMg01no404_b14.g1 CHROMAT_FILE:
MSMg01no404_b14.g1 PHD_FILE: MSMg01no404_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:38 2005
(291 letters)
>mm_chr18_50409826_50410516
Length = 691
Score = 547 bits (283), Expect = e-160
Identities = 289/291 (99%)
Strand = Plus / Minus
Query: 1 tgaaaaagatttatttactgaaaagcatcccaaatatctcattagtctgcttttcatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tgaaaaagatttatttactgaaaagcatcccaaatatctcattagtctgcttttcatttc 432
Query: 61 gtaaactttcctttcattaaaagtgtcatgctctgcagttcaggggaaaaaaaataatac 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 431 gtaaactttcctttcattaaaagtgtcatgctctgcagttcagggggaaaaaaataatac 372
Query: 121 tgcctctgaggaggcccagctgtggagcagaaggggcgagttagatctgaacttgacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgcctctgaggaggcccagctgtggagcagaaggggcgagttagatctgaacttgacttg 312
Query: 181 cgggcatcacaggctaacctgggtttcttcatctgaaaggagaagacaaatgcctctgaa 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 311 cgggcatcacaggctaacctgggtttcttcatctgaaaggagaaggcaaatgcctctgaa 252
Query: 241 tactgaagtcagttgtatgacttgggtaccttgttttgtttcttcaaggct 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tactgaagtcagttgtatgacttgggtaccttgttttgtttcttcaaggct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
