Query= MSMg01no405_c23.b1 MSMg01no405_c23.b1 CHROMAT_FILE:
MSMg01no405_c23.b1 PHD_FILE: MSMg01no405_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:05 2005
(450 letters)
>mm_chr18_83115900_83116749
Length = 850
Score = 816 bits (422), Expect = 0.0
Identities = 443/450 (98%)
Strand = Plus / Minus
Query: 1 tctccctttaaattctagcaagccccacataaactggtgtgagtactgtcacatcagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tctccctttaaattctagcaagccccacataaactggtgtgagtactgtcacatcagcac 591
Query: 61 ccagacacagggaagcagccacacgactttctaggaaactgtggtctttccagcaagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ccagacacagggaagcagccacacgactttctaggaaactgtggtctttccagcaagccc 531
Query: 121 tttctttccgcacctcaggctgagcagtggacaccacatgcaatcataggaaaacattca 180
|||||||| |||||||||||||||||||||| ||| |||||||||| |||||||||||||
Sbjct: 530 tttctttctgcacctcaggctgagcagtggatacctcatgcaatcacaggaaaacattca 471
Query: 181 aggtctaagtgggactctatcttccaaagtaaacaaagtcagaacaagggagtgcagggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aggtctaagtgggactctatcttccaaagtaaacaaagtcagaacaagggagtgcagggc 411
Query: 241 aagaaacctctgtgccttttcccttactatgaaagcatgctcacagcctaggaaccaagg 300
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 410 aagaaacctctgtgcctttccccttactatgaaaacatgctcacagcctaggaaccaagg 351
Query: 301 ttacactcagagaagctcaaaagtgaacgaaggtgggcgctttcttccctagttattaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ttacactcagagaagctcaaaagtgaacgaaggtgggcgctttcttccctagttattaac 291
Query: 361 tacctactgggtcagtaacagacttgaatccaatacagggttggggttttgagtcaaagt 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tacctactgggacagtaacagacttgaatccaatacagggttggggttttgagtcaaagt 231
Query: 421 gcaagagcatccattatgtgcacctacctg 450
||||||||||||||||||||||||||||||
Sbjct: 230 gcaagagcatccattatgtgcacctacctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_c23.g1 MSMg01no405_c23.g1 CHROMAT_FILE:
MSMg01no405_c23.g1 PHD_FILE: MSMg01no405_c23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:05 2005
(424 letters)
>mm_chr18_82952377_82953201
Length = 825
Score = 814 bits (421), Expect = 0.0
Identities = 424/425 (99%), Gaps = 1/425 (0%)
Strand = Plus / Plus
Query: 1 tgagagccaccatgctgccagttttgggtggtataaagaagcaattgtaagttttttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagagccaccatgctgccagttttgggtggtataaagaagcaattgtaagttttttttt 260
Query: 61 t-aatatgtatcactatggcattaaggatagaaacatctattttaattactggttattct 119
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatatgtatcactatggcattaaggatagaaacatctattttaattactggttattct 320
Query: 120 tataatatatgcacaggtgtttcaacggcttccactaaaacagtggataattaactttaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tataatatatgcacaggtgtttcaacggcttccactaaaacagtggataattaactttaa 380
Query: 180 aatacttatgtgattaaaaacatgattcattgatgccctttaaggcaagacactgtatct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatacttatgtgattaaaaacatgattcattgatgccctttaaggcaagacactgtatct 440
Query: 240 tgtttggtttttgacacattacatgttcaaaaatgcagatgggcatttaatttggtgtgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtttggtttttgacacattacatgttcaaaaatgcagatgggcatttaatttggtgtgg 500
Query: 300 caacattaaaaccagatgcaaagcacaataacaatctacttggaattcttgaattttgtc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caacattaaaaccagatgcaaagcacaataacaatctacttggaattcttgaattttgtc 560
Query: 360 tcttaataaccaactgatttgtcttccagtatataattcatatggccaataaccatcact 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcttaataaccaactgatttgtcttccagtatataattcatatggccaataaccatcact 620
Query: 420 tgggt 424
|||||
Sbjct: 621 tgggt 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 825
Length adjustment: 9
Effective length of query: 415
Effective length of database: 816
Effective search space: 338640
Effective search space used: 338640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
