TTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAATAATATTTACGAGTCATAGGCAAACACAGTGCAGAAAAATTTC
CTCTCAGCCATGATAATGAGTGTGGCTGTCCTTGCAAGCCACCGGCTGCG
GTTTGAGTCTGCCCATGGACTTATGTGGTCTTCCTCTGACTGAGCTATTT
TGGGAAGGTCTGGAGACTTTGGGAGGTGGGGGTCTAGCTGGTGGCAGTAG
GTCACTGGAAGCTGGGGGGATGGTCCTTCATGGGTGTGTTATCCCTTCCC
ACTTCCTGTCTTACTCTGCTTTCTTGTTTCGGCCATTGATGTGAAGAGCC
TCGGCCACCGCCACCCACTCCAGCTGCCATGATCTGAGCTGTGCTGTCCT
TGCCTTTCCCATCAGGACAGAAACTCGGAAACTGCGAGCCAAGATAAAGC
TCTGTTTCCTGTGCTTGCTGAGTTGTTTTGTTGCAGTGGTGTGAAAAGCA
GTTCACAGACCACCCTATCCCTCTCACTGATAAAAGAGCACTGGAACTTT
GGAAACTGGGATACATTATTTATCATAGAACCCTTTTATTTGTAATTGAA
AGGACTCAGTCTCATAGATGGAAAGCCCCAGTCAAACCAATCTAGGTTAA
TATCCAAAGGGGAGAATATTTTTTTTCTTTCTCTGGTCCCCCCTCATATG
TATAATCCTCTCCTCCCTTAACCCCTACCTGAAACCCATTAAAAAAACAT
CTTTTCTTTTTTTTTTTCCCTACTTGCACCCG

GCATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTGCACACTTCAAAATTCAGACTGAT
GAGACAGATAATGGGAGACACTCTCATTCATCTTTTTAATATGTTTCCAT
TTTTATCATCATCTGCTGGAGGGTAGGACTTCTGCAACTAAAGAGCATCT
TCTACACTGCAGACAAGCAGCAACAGATGGTTTCCCCTCGGTTCATGTTT
CACAGCGCCACTCTCAAGCACTCTGCTTAGAGGATTTAGATACTTTAAGC
TTTCTGAAAGTTCCGCCAATCCTTGTAGTTTAGCCGTTCCACTCACCACC
AATTAACATATGTTGGCACACTAAGAGTATGTCTAAACTGGAAGAAGGCA
GCATACAATCTTATCCAAACAGCGTGGAACATGCCTTTAATTTCTGCACC
TAAGGGCAGAGGAAGATCTCTTTGTGTTCACGGCTAGCTCTGTCTAGATA
ACAAGTTCCAGGTTAGCTAGGGCAATAGAAATCCTGTATTTAAAGTACCT
GATATTAGATCAGTTTGAACAGAATCAGGGTCAGTAGTTATTGGAAACTA
TAGTACATGCTACGATTCAATCTGAATCATCATAAATCTCACCATAATCA
CATCATTAATTCAATGTTATAACCATTTCCAAATTCCTAATTCCCTGAAG
ACAATGCAAAAATGGACCCCCTACAATGAATTTGCTTTAATTAAATTCTC
CCGCAACTTCTATTTT

Query= MSMg01no405_k19.g1 MSMg01no405_k19.g1 CHROMAT_FILE:
MSMg01no405_k19.g1 PHD_FILE: MSMg01no405_k19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:44 2005
         (530 letters)



>mm_chr18_65594267_65595196
          Length = 930

 Score =  957 bits (495), Expect = 0.0
 Identities = 519/527 (98%), Gaps = 1/527 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgcacacttcaaaattcagactgatgagacagataatgggagacactctcattcatctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttgcacacttcaaaattcagactgatgagacagataatgggagacactctcattcatctt 490

                                                                       
Query: 61  tttaatatgtttccatttttatcatcatctgctggagggtaggacttctgcaactaaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tttaatatgtttccatttttatcatcatctgctggagggtaggacttctgcaactaaaga 430

                                                                       
Query: 121 gcatcttctacactgcagacaagcagcaacagatggtttcccctcggttcatgtttcaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gcatcttctacactgcagacaagcagcaacagatggtttcccctcggttcatgtttcaca 370

                                                                       
Query: 181 gcgccactctcaagcactctgcttagaggatttagatactttaagctttctgaaagttcc 240
           || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 369 gccccactctcaagcgctctgcttagaggatttagatactttaagctttctgaaagttct 310

                                                                       
Query: 241 gccaatccttgtagtttagccgttccactcaccaccaattaacatatgttggcacactaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gccaatccttgtagtttagccgttccactcaccaccaattaacatatgttggcacactaa 250

                                                                       
Query: 301 gagtatgtctaaactggaagaaggcagcatacaatcttatccaaacagcgtggaacatgc 360
           |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 249 gagtatgtctaaactggaagaaggcagcatccaattttatccaaacagcgtggaacatgc 190

                                                                       
Query: 361 ctttaatttctgcacctaagggcagaggaagatctc-tttgtgttcacggctagctctgt 419
           |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 189 ctttaatttctgcacctaagggcagaggaagatctcttttgtgttcactgctagctctgt 130

                                                                       
Query: 420 ctagataacaagttccaggttagctagggcaatagaaatcctgtatttaaagtacctgat 479
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ctagataacaagatccaggttagctagggcaatagaaatcctgtatttaaagtacctgat 70

                                                          
Query: 480 attagatcagtttgaacagaatcagggtcagtagttattggaaacta 526
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  attagatcagtttgaacagaatcagggtcagtagttattggaaacta 23


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space:   478400
Effective search space used:   478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)