NCCCATXXXXXXXXXXXXXXXXXXXXXXXXXXXAACCAAGAGAAGCCGCG
GAAATCATCAATACCCCACACTTGCATTCAGATTTATTCAAAATTTTAGG
AAACAGACAAAATACAGATACCACTGTGTGTGTGTATCTCTCTCTCTCTC
TGTCTGTATGTGTGTGTGCCCCNCNCTCCCCCNCNCCCCCNCCCCCCCCC
CCCCCCNCNNNNNNNCCCCCCCCCCCCCCCCCCNNCAACCCCACACCCAA
AACAACCACCAACCTCAACCAACCCCACACCCCCAACACCCCAAACCACC
CCAACCACCACCTTTACACCCACCAANAACACCCCCCAACAACCACAACC
CCACCCCCCACCCAAAACCCCCACCCAAACCCACACACACCACCTACCAA
CATCCCCCCCCCCCCCAACCACCAAACACCACCCCCACCCCCCCCCCCCC
CCCCCCCCCCACCAACCCCCCCCCAATCCACCCACCCCCCCCCACCCAAC
CCCAAAAACCCCACCCCACAACCCCCCCACCACACCCCCACCCAACCCCC
CCACCACAAAAACCCACACCAAACCCACCCCCACACCCACACCACCCCCA
CACCACCCACCACACACACCCCCCCCCCCCCAAAAACCACCCCCCACCCC
ATCTACCCCACCACCCCCCCCTCCCAAACACACCAAACACCACCACCTAA
CANAACACCCCCACANAAACAACAACCCCCCACCCCACACAACACCACCC
CAC

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCATTTTTGCTGAGGATACACCAGGGTGAACA
TTTCCGAGAGGTGATGAAGCAGATACAGAGCCTGCTGGACATCCAGGAGA
AGGAGTTTGAAAAGTTTAAATTTGCAATTTTCATGATGGGTCGCCATCAA
TGAAGATGAGTATGAAGTGAATTAGAAGGACTTTGAGCCACAACCTGGTA
ACATGTCTCATCCTCGGCCTTGGCTAGGGCTTGACCACTTCAAAAAAGCC
CCAAAGAGGAGTCGCTACTCTTACCTAGAAAAGGCAATTAAAATCCACAA
CTGACTTCCTTCCCGTGTCCAAGATGAGGGACAGTGCGTGGGTGTGTGCC
CTTTTTAACAGCCGTAGACCTCTGGTGCACGTGCACTCTCCTCGAGGTCT
CCAGCAAGAGGATTTGCTGCTGATGTTTTATTTTGTTGAGGCTGTTTAGT
TTGGCTTCTCTGTATCTATTGACTGCCCTTTTTGAGCANAATGAAGGTGT
TTTTATAAAGCTTGGGGAAAAAAAGGAAGATATTCCACAATGTATTTTGT
TATTGTCTATAGAGATTAAGAAAGGATATTAAAACCTTTCTAGAATGTCC
TTCGAATTCCACCTTATGGTTCCTATTTACCTTGCTTACTACCCCCTAAT
TGCGTTGTGCCCTTTTCTCTCTTTTATACACTCCCCCCCCCATCTTTTTT
TATTTAGC

Query= MSMg01no408_a16.g1 MSMg01no408_a16.g1 CHROMAT_FILE:
MSMg01no408_a16.g1 PHD_FILE: MSMg01no408_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:53 2005
         (468 letters)



>mm_chr18_89548314_89549181
          Length = 868

 Score =  843 bits (436), Expect = 0.0
 Identities = 460/468 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   catttttgctgaggatacaccagggtgaacatttccgagaggtgatgaagcagatacaga 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 668 catttttgctgaggatacaccaggttgaacatttccgagaggtgatgaagcggatacaga 609

                                                                       
Query: 61  gcctgctggacatccaggagaaggagtttgaaaagtttaaatttgcaattttcatgatgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gcctgctggacatccaggagaaggagtttgaaaagtttaaatttgcaattttcatgatgg 549

                                                                       
Query: 121 gtcgccatcaatgaagatgagtatgaagtgaattagaaggactttgagccacaacctggt 180
           | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 548 gccgccatcaatgaagatgagtatgaagtgaatttgaaggactttgagccacaacctggt 489

                                                                       
Query: 181 aacatgtctcatcctcggccttggctagggcttgaccacttcaaaaaagccccaaagagg 240
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aacatgtctcattctcggccttggctagggcttgaccacttcaaaaaagccccaaagagg 429

                                                                       
Query: 241 agtcgctactcttacctagaaaaggcaattaaaatccacaactgacttccttcccgtgtc 300
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 agtcgctacacttacctagaaaaggcaattaaaatccacaactgacttccttcccgtgtc 369

                                                                       
Query: 301 caagatgagggacagtgcgtgggtgtgtgccctttttaacagccgtagacctctggtgca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 caagatgagggacagtgcgtgggtgtgtgccctttttaacagccgtagacctctggtgca 309

                                                                       
Query: 361 cgtgcactctcctcgaggtctccagcaagaggatttgctgctgatgttttattttgttga 420
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cgtgcactctcctcgaagtctccagcaagaggatttgctgctgatgttttattttgttga 249

                                                           
Query: 421 ggctgtttagtttggcttctctgtatctattgactgccctttttgagc 468
           ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggctgttcagtttggcttctctgtatctattgactgccctttttgagc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space:   392964
Effective search space used:   392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)