Query= MSMg01no408_n12.b1 MSMg01no408_n12.b1 CHROMAT_FILE:
MSMg01no408_n12.b1 PHD_FILE: MSMg01no408_n12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:57 2005
(453 letters)
>mm_chr18_13631951_13632803
Length = 853
Score = 837 bits (433), Expect = 0.0
Identities = 445/449 (99%)
Strand = Plus / Plus
Query: 5 gaattcattaattctcctgctgggacaaaaacggatgttggcttcctttcttaaacaacc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattaattctactgctgggacaaaaacggatgttggcttcctttcttaaacaacc 264
Query: 65 agatttgttactctaaataaaaccacgctactattacacatttcttgtgctttagtattg 124
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 265 agatttgttactctaaataaaaccacgctactattacacattccttgtgctttagtatta 324
Query: 125 tttaggaagtctccattctcctggctttctaaaaagtttccttgcacagagcttctgtca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttaggaagtctccattctcctggctttctaaaaagtttccttgcacagagcttctgtca 384
Query: 185 aaatgacattattgaccttcctggtgcctagttcaccccagaattccttcccacagagtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaatgacattattgaccttcctggtgcctagttcaccccagaattccttcccacagagtg 444
Query: 245 aggtgtgcctttaggggaaattccaggcacattttatccagggtctctggtttctcaacc 304
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 445 aggtgtgcctttaggggaaattccaggcacattttatccaggatctctggtttctcaacc 504
Query: 305 ttggtctgcacatctaggctactccatgcagcaaagtttcgtgggccatgacccgcccct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttggtctgcacatctaggctactccatgcagcaaagtttcgtgggccatgacccgcccct 564
Query: 365 gcacaggtgagtctggcaaaattcaaatcttcagggaaatatcaggaaacacatttgtag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcacaggtgagtctggcaaaattcaaatcttcagggaaatatcaggaaacacatttgtag 624
Query: 425 ctattagtcaagcatggctcccatttcag 453
|||||||||||||||||||||||||||||
Sbjct: 625 ctattagtcaagcatggctcccatttcag 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_n12.g1 MSMg01no408_n12.g1 CHROMAT_FILE:
MSMg01no408_n12.g1 PHD_FILE: MSMg01no408_n12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:57 2005
(340 letters)
>mm_chr18_13774782_13775521
Length = 740
Score = 584 bits (302), Expect = e-171
Identities = 338/368 (91%), Gaps = 28/368 (7%)
Strand = Plus / Minus
Query: 1 caagacagccagagctacataaccctgttttgagaagaagacagcaacagaaaattattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 caagacagccagagctacataaccctgttttgagaagaagacagcaacagaaaattattt 642
Query: 61 gagattattattttatctcgtgttcagtgttcttattacaacactaagca---------- 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gagattattattttatctcgtgttcagtgttcttattacaacactaagcaaaataaataa 582
Query: 111 ------------------aaataaataaataaataaataaaggttgggtatttttatatc 152
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ataaataaataaataaataaataaataaataaataaataaaggttgggtatttttatatc 522
Query: 153 ttggtcacagtgacagttacacaagcttattagtatctataaatttgcaatattgtatgt 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ttggtcacagtgacagttacacaagcttattagtatctataaatttgcaatattgtatgt 462
Query: 213 gtgaatcatgtgcaatttctctatttcaaacattctttggtgaagcttgaaggggattct 272
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 461 gtgaatcatgtgcgatttctctattccaaacattctttggtgaagcttgaaggggattct 402
Query: 273 ttgagctacactattcagacttccacagtagatcttgtggcataagacattaagatattt 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ttgagctacactattcagacttccacagtagatcttgtggcataagacattaagatattt 342
Query: 333 gttctctc 340
||||||||
Sbjct: 341 gttctctc 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
