Query= MSMg01no411_n07.b1 MSMg01no411_n07.b1 CHROMAT_FILE:
MSMg01no411_n07.b1 PHD_FILE: MSMg01no411_n07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:00 2005
(416 letters)
>mm_chr18_23732209_23733023
Length = 815
Score = 739 bits (382), Expect = 0.0
Identities = 403/412 (97%), Gaps = 5/412 (1%)
Strand = Plus / Plus
Query: 5 gaattcttcaatgtccatctcttattttcttgctagttctctgaaaaaaatactactggc 64
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 gaattcttcaatgtgcatctcttattttcttgctagttctctg-aaaaaatactactggc 263
Query: 65 aacataatcataattttattagctttaaggccagtcacatctttccctttaagatacttc 124
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 264 aacataatcataattttattagctttaaagccagtcacatctttccctttaagatacttc 323
Query: 125 ctcacaaagttggttatatgatgacagtggccaccattttgttttgttttgttttaaatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctcacaaagttggttatatgatgacagtggccaccattttgttttgttttgttttaaatt 383
Query: 185 tggtttgttgctgttgttgtttgtttgcttgcttgcttgcttgcttgtttgcttgctttt 244
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 384 tggtttgttgctgttgttgtttgt----ttgcttgcttgcttgcttgtttgcttgctttt 439
Query: 245 tgccaatatcattcccatatgtatctggtttactcaaagtcctcttatggcagtgaccag 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 440 tgccaatatcattcccatatgtatctggttcactcaaagtcctcttatggcagtgaccag 499
Query: 305 tattacagggagtggtgttctaagctgcatttctaatactgatcctccaatgataacatt 364
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgttacagggagtggtgttctaagctgcatttctaatactgatcctccaatgataacatt 559
Query: 365 acatgtgggttgcttttctcatttctatggcaaaatacccgatagaggtgtc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acatgtgggttgcttttctcatttctatggcaaaatacccgatagaggtgtc 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 815
Length adjustment: 9
Effective length of query: 407
Effective length of database: 806
Effective search space: 328042
Effective search space used: 328042
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_n07.g1 MSMg01no411_n07.g1 CHROMAT_FILE:
MSMg01no411_n07.g1 PHD_FILE: MSMg01no411_n07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:01 2005
(476 letters)
>mm_chr18_23926000_23926875
Length = 876
Score = 920 bits (476), Expect = 0.0
Identities = 476/476 (100%)
Strand = Plus / Minus
Query: 1 aattccagcaccttatgtccaaagtctgcctgcagcatatctgttccacctagaaagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aattccagcaccttatgtccaaagtctgcctgcagcatatctgttccacctagaaagatt 617
Query: 61 tctccacacctgaactcaaacaactgctgacattctgcctggtcaaaaaatggtaggaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tctccacacctgaactcaaacaactgctgacattctgcctggtcaaaaaatggtaggaac 557
Query: 121 ataagagagatatcaggaggaaacatggatgcaaaagtatctccaatcatgcatgccacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ataagagagatatcaggaggaaacatggatgcaaaagtatctccaatcatgcatgccacc 497
Query: 181 agattattattctttctgctctgaagctggccaacatagctctgatctacacgaggtcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agattattattctttctgctctgaagctggccaacatagctctgatctacacgaggtcgg 437
Query: 241 atcactctgttcttagagacagcatcaggcctctccaggtacccccagctttttcaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 atcactctgttcttagagacagcatcaggcctctccaggtacccccagctttttcaagaa 377
Query: 301 ggtgtcccagctggggcctgagcctgggtttcctcccagggtttgactcagtcttcccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ggtgtcccagctggggcctgagcctgggtttcctcccagggtttgactcagtcttcccag 317
Query: 361 gtcttcagaatgagttgtagcctgaatttccaaactctttattacattctgagatactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gtcttcagaatgagttgtagcctgaatttccaaactctttattacattctgagatactga 257
Query: 421 gtggctccagctgcagatcatattctagcctgtgggaggtccattgctttctagga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gtggctccagctgcagatcatattctagcctgtgggaggtccattgctttctagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
