Query= MSMg01no412_b06.b1 MSMg01no412_b06.b1 CHROMAT_FILE:
MSMg01no412_b06.b1 PHD_FILE: MSMg01no412_b06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:20 2005
(534 letters)
>mm_chr18_65430920_65431853
Length = 934
Score = 1002 bits (518), Expect = 0.0
Identities = 527/530 (99%)
Strand = Plus / Plus
Query: 5 gaattctcagattcctggtgttgctaagacatctcaaatatttggtgttgtacagtgacc 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcagaggcctggtgttgctaagacatctcaaatatttggtgttgtacagtgacc 264
Query: 65 taggtccttctgtgggatgcaatcaaaagatgttggcaaagtttgaactaagtcgctttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taggtccttctgtgggatgcaatcaaaagatgttggcaaagtttgaactaagtcgctttg 324
Query: 125 cttctgtccctgctggcagatgtgtgtatcgctttaagcagtgtgcccagtgttatatac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttctgtccctgctggcagatgtgtgtatcgctttaagcagtgtgcccagtgttatatac 384
Query: 185 aaacctctctggggtgtggtaccaatgaggagattctgctccttcccgtattaagtcact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaacctctctggggtgtggtaccaatgaggagattctgctccttcccgtattaagtcact 444
Query: 245 gttgggggttcctctccatggacactcaagtgtgatactattggattgtgttatgcatct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttgggggttcctctccatggacactcaagtgtgatactattggattgtgttatgcatct 504
Query: 305 aggtagcccttgtcccttctgccacagtgggcacacaagggcttcttagggcactgctct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aggtagcccttgtcccttctgccacagtgggcacacaagggcttcttagggcactgctct 564
Query: 365 tgattccgagggagttgccttttctctcagagtacttgagtagacctgggcaagcaggca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgattccgagggagttgccttttctctcagagtacttgagtagacctgggcaagcaggca 624
Query: 425 acccctgggccagccagtaaaagcatctatccccagctgcatctgcccttcccaccacac 484
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 625 acccctgggccagccagtaaaagcatctatccccagctgcatctgccctacccaccacac 684
Query: 485 ttttggccctcttcaaggaacaagtctgagtctcttacatgtggtttcca 534
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttttggccctcttcaaggaacaagtctgagtctcttacatgtggtttcca 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_b06.g1 MSMg01no412_b06.g1 CHROMAT_FILE:
MSMg01no412_b06.g1 PHD_FILE: MSMg01no412_b06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:20 2005
(367 letters)
>mm_chr18_65672633_65673399
Length = 767
Score = 582 bits (301), Expect = e-170
Identities = 350/367 (95%), Gaps = 2/367 (0%)
Strand = Plus / Minus
Query: 1 agaggagaaccatttcacaaaaacacgggggaggtgggtcctccttcctggtttatctta 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agaggagaaccacttcacaaaaacacgggggaggtgggtcctccttcctggtttatctta 314
Query: 61 agaactggggaagattcattccagcatgtgttctagatgtctgtggagctgggtctatca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 313 agaactggggaagattcattccagcatgtgttctagatgtctgtggagctgggtctttta 254
Query: 121 cccttcttctggttctttgtcctgtttcgagtcctcttttcaaatgcatatgtggagctg 180
||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||
Sbjct: 253 cccttcttctggttctttgtcctgtctagagtcctcttttcaaatgcatatgtggaactg 194
Query: 181 gggttttatcctagaggtttagtgtttatctagcatgcacaagggcttgtgttcaattct 240
| | | |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gagatatatcctagtggtttagtgtttatctagcatgcacaagggcttgtgttcaattct 134
Query: 241 agttttgtgtgtgcgcgcacgcatacacacatacacgaaccccatacaaagacaaagaga 300
||||||||||||| ||||| ||||||||||| |||| | ||||||||||||||||||||
Sbjct: 133 agttttgtgtgtgtgcgcatgcatacacacacacac--atcccatacaaagacaaagaga 76
Query: 301 gaaagaacatgcactggcaagaaggaagttgctagaatgacatcagtcttcctggaaagc 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 gaaagaacatacactggcaagaaggaagttgctagaatgacatcagtcttcctggaaagc 16
Query: 361 aatgaag 367
|||||||
Sbjct: 15 aatgaag 9
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
