Query= MSMg01no412_e18.b1 MSMg01no412_e18.b1 CHROMAT_FILE:
MSMg01no412_e18.b1 PHD_FILE: MSMg01no412_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:37 2005
(502 letters)
>mm_chr18_27354738_27355639
Length = 902
Score = 940 bits (486), Expect = 0.0
Identities = 498/502 (99%)
Strand = Plus / Plus
Query: 1 tgcaatggctcaggtatatgaaatgccagagagaaatcgcttcaattgaattctaagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcaatggctcaggtatatgaaatgccagagagaaatcgcttcaattgaattctaagctg 260
Query: 61 tgagaatggattaatatagttacaatactgatatcatatacttacaataaattgtctata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagaatggattaatatagttacaatactgatatcatatacttacaataaattgtctata 320
Query: 121 tgaagttcaatagcatgtataaagtatacatgcaaagtaaggtataaaatttacatttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaagttcaatagcatgtataaagtatacatgcaaagtaaggtataaaatttacatttga 380
Query: 181 aataaacataataatataggtatgcattttatgtcccccttttcaatgtcattacaaaat 240
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 381 aataaacataataatataggtatgcatcttatgtcccccttttcattgtcattacaaaat 440
Query: 241 tttgggagtgtgtctataacagatttggcttattaacagtagcaaatcaaagaaacagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgggagtgtgtctataacagatttggcttattaacagtagcaaatcaaagaaacagat 500
Query: 301 atgtaaaaagtggctaagaacttattctaggacatcttctttattaaatgcattacctgt 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 atgtaaaaagtggctaagaacttattctagaacatcttctttattaaatgcattacctgt 560
Query: 361 ttgcctgcctggtgtaaattaattccaaaactggtcttggaaaatcttgcacctcaattt 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgcctgcttggtgtaaattaattccaaaactggtcttggaaaatcttgcacctcaattt 620
Query: 421 acatgtctatggaaaatgtgattccatactaaaatacccattgcattagttaaatttcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acatgtctatggaaaatgtgattccatactaaaatacccattgcattagttaaatttcag 680
Query: 481 aatgatttctgaggtgtaagac 502
||||||||||||||||||||||
Sbjct: 681 aatgatttctgaggtgtaagac 702
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_e18.g1 MSMg01no412_e18.g1 CHROMAT_FILE:
MSMg01no412_e18.g1 PHD_FILE: MSMg01no412_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:37 2005
(338 letters)
>mm_chr18_27560746_27561483
Length = 738
Score = 572 bits (296), Expect = e-168
Identities = 327/344 (95%), Gaps = 12/344 (3%)
Strand = Plus / Minus
Query: 1 tggtaccagacaggcttgctttatttgaaagctgtggtaaatattacccctgaaatttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tggtaccagacaggcttgctttatttgaaagctgtggtaaatattacccctgaaatttca 479
Query: 61 gccaatggatgacagtttttaaagttcagaaaattgtttgcttttttattatgaacacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gccaatggatgacagtttttaaagttcagaaaattgtttgcttttttattatgaacacaa 419
Query: 121 gtaacagtgatccttcatttgacatagaataattaaaataatcatatacaatgtggaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gtaacagtgatccttcatttgacatagaataattaaaataatcatatacaatgtggaata 359
Query: 181 ttgttgctagtcaatcaatttttggaaggcacccttgtgaattgtattgtagtctctgtt 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttgttgccagtcaatcaatttttggaaggcacccttgtgaattgtattgtagtctctgtt 299
Query: 241 a------tttttttttacattgaaaaagagaaaattaaatatttatacaaagtatcccta 294
| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 298 agcaaag------tttacattgaaaaagagaaaattaaatatttatacaaagtgtcccta 245
Query: 295 taataaaatacctgtggaaataagcagttttagaaaagtgtttg 338
||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 244 taagaaaatacctgtggaaataagttgttttagaaaagtgtttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
