XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
AGACATTGCCTCACCACATAAATTAAAGGCATCCTTGAAAGCATGACCCA
CCATGGTGGTAAAAGCAAGTTTTCAAACCTTGAGAACACATACTGTTCCC
CATTTCAGCCCTACTTCAAAGGACCCTTGTTCTAAATAACATGTAGTAAT
ATGTCTAAACATTTCAGAAATATTTTCACATTCCAATGAGCAAATTAAAA
CCACAACTTGCTGACATGGCATGTATTTCTAAATACTTTCTGTTTTGTAG
TTGCATGCCATTAATATATAAACTTTGAAACACAATTGAGACTGAAAAAG
TAAATGAACATATTAACAACACATCAAAATCACATCCTTTAGAGTATGAG
TAACAGTGAGTTTAGTAGTATTTTATCAATCCCAAAGAAAAGTTCAAATA
CCTTCAAAGAAAGTATATAGAAATTCATAGAAATTTATGGGAAGGAACGT
GGAGACCAAATAAATACCATACGTGGGGCCAGAAGAGTTGATGTAAGAGC
TAAGAGCACATGTTCTTGTAGAGAACCAGATTAGATTCCTATTATCACAT
GTTAGCTCACAATCAACCATAATTCGAATTCCAGATAATCTAGCATCTTG
TTCTGACTTCTGAGAGCATCAGGCATACATGTACATAGATATACATGCAG
GCAATGCCCACAGAGACACCCATTTTAAATCATT

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAGAAAGACTGCAGCAACGTTCAAGGGCCTCTGTG
TTGATGTTCCAGATGGGGTCCCAGCACTGAAAAGAGAATCCTAAACAAGC
CCCAACCCTAACCCAGAAGCTACCTCCACTAGCCAATGAAAAATTAGGAC
TTTTCTAATGGAGTATGTCTCCTAGGATACAAAACACTCCTAATACCAGT
TCCTATTCCCAGCATAGATGGCCAACAGAAAACTAACTCAATGGCATCTT
TTGTGAATCTTTGTCTCAAAATGGTTGTTCATTTGTTTGTTTCCTTTTAG
AAGATTTATTTGTTTATTTTACATAAGTGAGTACACAGTCACTCTCTTCA
GACACACCAGAAGAGGGCATCAGATCCCAATGCAGATCATTGTGAGCCAC
CATATGGTCACTGGTAATTGAACTCAGGACCCCTGGAAAAGCAGTCAGTA
CTCTTCAGCACTGAGCCACCTCTCTTGTGGTTTGTTTTGTCAGGGTGTTG
TTTTGTTTGCTTATTTGCTTGCACGCTTGATTGGTTGCTTGCGCGCCTGC
CCGTTTCCTCTTTTTTCTCTCCCCTTTCCCTTCCCTTCTTTCCTCTTCCT
CTCCTCCCCTCCTCCCTNCTCTTCCCTTTTCTTCCTTCTTCTCCTTTCCC
CTCCTCTCTCCTTTTTTTCTCTCCCCC

Query= MSMg01no415_d13.b1 MSMg01no415_d13.b1 CHROMAT_FILE:
MSMg01no415_d13.b1 PHD_FILE: MSMg01no415_d13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:32 2005
         (579 letters)



>mm_chr18_51584311_51585289
          Length = 979

 Score = 1027 bits (531), Expect = 0.0
 Identities = 564/575 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaagacattgcctcaccacataaattaaaggcatccttgaaagcatgacccacca 64
           |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagacactgtctcaccacataaattaaaggcatccttgaaagcatgacccacca 264

                                                                       
Query: 65  tggtggtaaaagcaagttttcaaaccttgagaacacatactgttccccatttcagcccta 124
            ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 265 cggtggtaaaagcaagctttcaaaccttgggaacacatactgttccccatttcagcccta 324

                                                                       
Query: 125 cttcaaaggacccttgttctaaataacatgtagtaatatgtctaaacatttcagaaatat 184
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttcaaaggacgcttgttctaaataacatgtagtaatatgtctaaacatttcagaaatat 384

                                                                       
Query: 185 tttcacattccaatgagcaaattaaaaccacaacttgctgacatggcatgtatttctaaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 385 tttcacattccaatgagcaaattaaaaccacaacttgctgacatggcatatatttctaaa 444

                                                                       
Query: 245 tactttctgttttgtagttgcatgccattaatatataaactttgaaacacaattgagact 304
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 tactttctgttttgtagttgcatgccattaaaatataaactttgaaacacaattgagact 504

                                                                       
Query: 305 gaaaaagtaaatgaacatattaacaacacatcaaaatcacatcctttagagtatgagtaa 364
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 505 gaaaaagtaaatgaacatattaacaatacatcaaaatcacatcctttagagtatgagtaa 564

                                                                       
Query: 365 cagtgagtttagtagtattttatcaatcccaaagaaaagttcaaataccttcaaagaaag 424
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 565 cagtgagtttagtagtattttatcaatcccaaagaaaagttcaaatactttcaaagaaag 624

                                                                       
Query: 425 tatatagaaattcatagaaatttatgggaaggaacgtggagaccaaataaataccatacg 484
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 625 tatatagaaattcatagaaatttatggaaaggaacgtggagaccaaataaataccatacg 684

                                                                       
Query: 485 tggggccagaagagttgatgtaagagctaagagcacatgttcttgtagagaaccagatta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tggggccagaagagttgatgtaagagctaagagcacatgttcttgtagagaaccagatta 744

                                              
Query: 545 gattcctattatcacatgttagctcacaatcaacc 579
           |||||||||||||||||||||||||||||||||||
Sbjct: 745 gattcctattatcacatgttagctcacaatcaacc 779


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)