GGGCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCACACATTATCCACTCACTGATAAGTGGATATTAGCCCAAA
ACTTAGGATACCCAAGATAGAAGATACAATTTGCTAAACGCATGAAACTC
AAGAAGAATGAAGACCAAAGTGTGGACACTGTGCCCCTTCTTAGAATTGG
GATATAGCTTCTTGTTTCAGTGTCTGGGATCTACACATGATCTGGGCTCC
TCCAAAGGGCTGGCTTCACTTCTCTAGCTCTGTCTTCTAGCATTCTAAGC
TCAGGTTGATCCACTCCACTGCTCCTGCTGTTCTTGGTGATCATCCCATG
GTACTGGCATCTCCAATATGCTGGGGTCTTCTACTACAAGTAGGCTTTAC
CAATAGCCTCTCATAGGCTCTCTTCACGATGCCAAGCCTCACCACCTTTG
CAATGACCCCTTGAGTCCTGAGGTATCAACTGCAACTGAAGTTGCACCTT
CACCAATAACCTTCCATGACCTCTCACAGTGCCAAGACTCAGCTACTTTT
CATGACTCCTTCATGCCTTCAAAACCAGCACCACCCAGTTACTCTTACAT
ATTACCCAGTAGAGCTGCCGCTCACGGTACAACCTTGGCTATCCGTGGAA
TACGGCTCCTTCTGCGTTTCACAATACACCTCCCAGAAGATTTCCTCTTA
CGGATGCTGGTTTCTTCTTAACCACTGTCTATTTTCTT

NTTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATTTCCTCATATAAATTCCA
TGATTTTGTTAACAGTTCATCAAAAATTCTGACTTTTGATCTCTGCACAA
TATATACAATATAGTAAAAGATAATGTATCTAATTTAATAAAATTGTTAT
TACTCAGATGATGATATTAGAGTAATTGAAAATGTGTGTTTTGATGTATT
GATATTTGGTCCTTCAACAACTTCCAAATTTGTTTTAGAATGTAGAGGTA
ATATTATCGTCTACATTTATCTCTCAGTAAAACTTGGGTAGGGGTCTATG
TGAGGAGAAAGTTCATGCAGTGAAGCAGAATATGAGTTTGTATGATCAGA
ATGTATATGCAAAATTCAATGCAGCCGTGTATGTCTATCTACAGGGCAAG
GGAAGCTAGGAACATTCATTGGCTGACTAGCCAGGCAGTCTAGCCAAATT
GATGAGCTCCACAGCGAGTTCTCATGCTTGCACGCACACACACACACACA
CACACACANANACANACANTTCCACATATTAATTAACTGAATTACTTATT
CTGAAATATGTTGACTATATAGCTATTCACACTCGATAATAACCAGAAAA
TATAGTACAGTCCCTAGGCTGATAAGCTCATGAAATTTGTTAAAAAGTAA
GCAATAACCTGATAACCATGGATATGAATTATGAAACGATTAAAG

Query= MSMg01no417_a09.g1 MSMg01no417_a09.g1 CHROMAT_FILE:
MSMg01no417_a09.g1 PHD_FILE: MSMg01no417_a09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:46 2005
         (479 letters)



>mm_chr18_86594426_86595304
          Length = 879

 Score =  893 bits (462), Expect = 0.0
 Identities = 474/478 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatttcctcatataaattccatgattttgttaacagttcatcaaaaattctgacttttga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tatttcctcatataaattccatgattttgttaacagttcatcaaaaattctgacttttga 419

                                                                       
Query: 61  tctctgcacaatatatacaatatagtaaaagataatgtatctaatttaataaaattgtta 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tctctacacaatatatacaatatagtaaaagataatgtatctaatttaataaaattgtta 359

                                                                       
Query: 121 ttactcagatgatgatattagagtaattgaaaatgtgtgttttgatgtattgatatttgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttactcagatgatgatattagagtaattgaaaatgtgtgttttgatgtattgatatttgg 299

                                                                       
Query: 181 tccttcaacaacttccaaatttgttttagaatgtagaggtaatattatcgtctacattta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tccttcaacaacttccaaatttgttttagaatgtagaggtaatattatcgtctacattta 239

                                                                       
Query: 241 tctctcagtaaaacttgggtaggggtctatgtgaggagaaagttcatgcagtgaagcaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tctctcagtaaaacttgggtaggggtctatgtgaggagaaagttcatgcagtgaagcaga 179

                                                                       
Query: 301 atatgagtttgtatgatcagaatgtatatgcaaaattcaatgcagccgtgtatgtctatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 atatgagtttgtatgatcagaatgtatatgcaaaattcaatgcagccgtgtatgtctatc 119

                                                                       
Query: 361 tacagggcaagggaagctaggaacattcattggctgactagccaggcagtctagccaaat 420
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 aacagggcaagggaagctaggaacattcattggctgactagccaggcagtctagccaaat 59

                                                                     
Query: 421 tgatgagctccacagcgagttctcatgcttgcacgcacacacacacacacacacacac 478
           |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 58  tgatgagctccacatcgagttctcatgcttgcacgcacgcacacacacacacacacac 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space:   407561
Effective search space used:   407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)