Query= MSMg01no426_g16.b1 MSMg01no426_g16.b1 CHROMAT_FILE:
MSMg01no426_g16.b1 PHD_FILE: MSMg01no426_g16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:56 2005
(226 letters)
>mm_chr18_31971170_31971795
Length = 626
Score = 416 bits (215), Expect = e-121
Identities = 221/223 (99%)
Strand = Plus / Plus
Query: 4 ggaattcatagattgccgtatctgtcagttccaaggcaggatttctgcaatagaagggct 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatagattgcggtatctgtcagttccaaggcaggatttctgcaatagaagggct 263
Query: 64 ttatctttttggacttttagcattaaaattacacttgttacctatgccaggagcagtagc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttatctttttggacttttagcattaaaattacacttgttacctatgccaggagcagtagc 323
Query: 124 taaagactccagggttttagttttgttttattttgttttgttttgttttttggggatggg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taaagactccagggttttagttttgttttattttgttttgttttgttttttggggatggg 383
Query: 184 cccttctaggctgtcctagactcactgtatatctggctggcct 226
||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 384 cccttctaggctgtcctagactcactgtagatctggctggcct 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 626
Length adjustment: 9
Effective length of query: 217
Effective length of database: 617
Effective search space: 133889
Effective search space used: 133889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no426_g16.g1 MSMg01no426_g16.g1 CHROMAT_FILE:
MSMg01no426_g16.g1 PHD_FILE: MSMg01no426_g16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:56 2005
(428 letters)
>mm_chr18_32141500_32142331
Length = 832
Score = 733 bits (379), Expect = 0.0
Identities = 412/425 (96%), Gaps = 4/425 (0%)
Strand = Plus / Minus
Query: 1 ccagaacctggtgtgtgcagtggtgatgaggctctgacaaaaagaaggcagaatgaggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ccagaacctggtgtgtgcagtggtgatgaggctctgacaaaaagaaggcagaatgaggac 756
Query: 61 tgacgcttgagtctgtcctctgacatccacacatgcactgtgccatgcatacacctgcac 120
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 755 tgacgcttgagtctgtcctctgacatccacacgtgcactgtgccgtgcatacacctgcac 696
Query: 121 atgtatgcacatgcacacagacacatgcacacacacacacatacacactacacatattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 atgtatgcacatgcacacagacacatgcacacacacacacatacacactacacatattta 636
Query: 181 catacacacaatttaaaaataattcacaacactttttttggtcaaaacctccttaaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 catacacacaatttaaaaataattcacaacactttttttggtcaaaacctccttaaggcc 576
Query: 241 caggttcatgcaatgaacgaaccaaaatccaaaggagttagctaagcagcagtgaccgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 caggttcatgcaatgaacgaaccaaaatccaaaggagttagctaagcagcagtgaccgta 516
Query: 301 gctgggggtccactgtagaaatccatgagtgctccatacactgagccactgagacccagc 360
|||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||
Sbjct: 515 actgggggtccactgtagaaatccatgagtgttccatacaccgagccactgaaacccagc 456
Query: 361 atgctgtgaggacccatttgaccacta----cagaggagcccaatagccctctgcagccc 416
||||||||||||||| |||| |||||| ||||||||||||||||||| |||||||||
Sbjct: 455 atgctgtgaggacccgtttgcccactaactacagaggagcccaatagccccctgcagccc 396
Query: 417 tgacc 421
|||||
Sbjct: 395 tgacc 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 832
Length adjustment: 9
Effective length of query: 419
Effective length of database: 823
Effective search space: 344837
Effective search space used: 344837
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
