Query= MSMg01no427_g04.b1 MSMg01no427_g04.b1 CHROMAT_FILE:
MSMg01no427_g04.b1 PHD_FILE: MSMg01no427_g04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:15 2005
(271 letters)
>mm_chr18_8333109_8333779
Length = 671
Score = 493 bits (255), Expect = e-144
Identities = 267/271 (98%)
Strand = Plus / Plus
Query: 1 ttgaaccaggaatagcacatggcttttaagacatcaaatctagccagcacaggtatataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ttgaaccaggaatagcacatggcttttaagacatcaaatctagccagcacaattatataa 260
Query: 61 gtgcttcaatatgaattgtgccaggaaagattttgtcaagtaatctaattaataagatta 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 gtgcttcaatatgaattgtgccaggaaagattttgtcaagtcatctaattaataagatta 320
Query: 121 tttaagaacacataattgtcctctactaaaaccatatttgcccatattgtccatagagtt 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaagaacatataattgtcctctactaaaaccatatttgcccatattgtccatagagtt 380
Query: 181 tgaaaggaacatcattttcttaaataggacacattcattctttctttgttgagccaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaaaggaacatcattttcttaaataggacacattcattctttctttgttgagccaagag 440
Query: 241 tctacatattatttttcaaagaaacatagaa 271
|||||||||||||||||||||||||||||||
Sbjct: 441 tctacatattatttttcaaagaaacatagaa 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 671
Length adjustment: 9
Effective length of query: 262
Effective length of database: 662
Effective search space: 173444
Effective search space used: 173444
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no427_g04.g1 MSMg01no427_g04.g1 CHROMAT_FILE:
MSMg01no427_g04.g1 PHD_FILE: MSMg01no427_g04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:15 2005
(296 letters)
>mm_chr18_8464439_8465134
Length = 696
Score = 520 bits (269), Expect = e-152
Identities = 288/295 (97%), Gaps = 3/295 (1%)
Strand = Plus / Minus
Query: 1 caggacagccaggactacacagaaaaatcctgttatgaagaatcagaactaaagcaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 caggacagccaggactacacagaaaaatcctgttatgaagaatcagaactaaagcaaaaa 546
Query: 61 tgaagaggaggaggaggaggaggaagagaaggagaagcaggaagaggaggaggcagaaga 120
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgaaga--a-gaggaggaggaggaagagaaggagaagcaggaagaggaggaggcagaaga 489
Query: 121 aagatccatgttagggtattagttccaagctttcagcccatgaacatttgaacccactgc 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aagattcatgttagggtattagttccaagctttcagcccatgaacatttgaacccactgc 429
Query: 181 tgtggatctgtggaagataagagtgtcatggtggagagggtgaacaaacagagtttctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgtggatctgtggaagataagagtgtcatggtggagagggtgaacaaacagagtttctta 369
Query: 241 ctctctttatgtttttcaagaaggagagagaggagaggggagagaggaagagtgg 295
||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctctctttatgaccttcaagaaggagagagaggagaggggagagaggaagagtgg 314
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
