NNGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTTCAGTATCACTGTCCCCAGACCTGAGATGCTGTGACACC
AAGTAGCCAAGCTACTTGTCAGAGTAAGCAGCCAGCAGCATACAAGAATC
ATCACACCCAGCTTTGAGTAGTTAGCAGTGTTTGAGTGCAAACAATGACA
AAGGGTGACTATTATTTACAGATGCTATACCCTGGGTTTTCAACCCCAGT
TACAGGAAGATGTTTTTTGGGGGAGAGCATTTAAAATAAAAATCCTGAAG
CACAAACGCTTTTCACAATAGTCTGCATTACTACCTCCAAAGATAGGGGT
GGGATGGCTTGAATATGAAGTGTCTGTCTCAGCATCACAACTCAAACATT
TCTAGTGAAGATATTTTGGGAGTGTCTGGAAAGTTTAGGAGGAAGCAGCA
CACTGGGAGTAGATTCTAATGGTATAGCTGTCTAGCTATTTGTTCTCTGC
ATTCTGTGTGCCATGGTGTGAAGAGCTGTGCCCTGCCACATCTTTCTGCT
GCCTGCTTTTCCTAGGCAAAAACAAGACCTAAAACCTCTGAACCTCTGCA
TGTCTTTTAGGGGGAGGGAGTAGTCATGTGTGCTTGTGTCTGTGCATGCA
TATGTTGCGGAAATACATGCATGTCTTTGTGCATGTATGCGAGTGTGAAT
GTTTGGTGATTGCTTGTCCCCCATTCTTTTTTATTCCTTGTG

TTCCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGACCTTTAT
CATGAATGGGTGTTGGATTTTGTCAAATGTGTCTAAGGAGATGATCTTGT
GGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACGTTGATGGATTTC
CATATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGG
ATGGATGATTGTTTTAATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
TGAGGATTTTTGGATCGATATTCATAATGTAAATTGGTCTGAAGTTCTCT
TTGTTGGATTTTTTTTTTTTTTTGGTGGTTTAGGTATCAGAGTAATTGTG
GCTTCATAGAATGAATTGGGTAGAGTACCTTCTGCTTCTATTTGTGGAAC
AGTTTGTGCAGAACAGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTC
TGCACTAAACCCATCTGGTCCTGGGCTTTTTTTGGTTGGGAGACTATTAA
TAACTGCTTCTATTTCTTTAGGGGATATGACTGTTTATGTCATTAACTTG
ATCCTGATTTAACTTTGGCACCTGTTATCTGTCTAGAAATTTGTCCATTT
CATTCAGGTTTTCCATTTTTGTTGAATATAGCCTTTTGTACATGGATCTT
GATGGTGGTTTGGATTTCTTTTTTTATCTGGTCGTATT

Query= MSMg01no427_m14.b1 MSMg01no427_m14.b1 CHROMAT_FILE:
MSMg01no427_m14.b1 PHD_FILE: MSMg01no427_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:45 2005
         (567 letters)



>mm_chr18_41176143_41177109
          Length = 967

 Score =  998 bits (516), Expect = 0.0
 Identities = 552/564 (97%), Gaps = 2/564 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccttcagtatcactgtccccagacctgagatgctgtgacaccaagtagccaagct 64
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 767 gaattccttcagtagcactgtccccaaacctgagatgctgtgacaccaagtagccaagct 708

                                                                       
Query: 65  acttgtcagagtaagcagccagcagcatacaagaatcatcacacccagctttgagtagtt 124
           ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||
Sbjct: 707 acttgtcagagtaagcagccagctgcatacaagaatcatgacacacagctttgagtagtt 648

                                                                       
Query: 125 agcagtgtttgagtgcaaacaatgacaaagggtgactattat-ttacagatgctataccc 183
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 647 agcagtgtttgagtgcaaacaatgacaaagggtgactattatcttacagatgctataccc 588

                                                                       
Query: 184 tgggttttcaaccccagttacaggaagatgttttttgggggagagcatttaaaataaaaa 243
           | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 587 ttggttttcaaccccagttacaggaagatgttttttgggggagagcatttaaagtaaaaa 528

                                                                       
Query: 244 tcctgaagcacaaacgcttttcacaatagtctgcattactacctccaaagataggggtgg 303
           |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 527 tcctgaagcacaaatgcttttcacaatagtctgcattacaacctccaaagataggggtgg 468

                                                                       
Query: 304 gatggcttgaatatgaagtgtctgtctcagcatcacaactcaaacatttctagtgaagat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gatggcttgaatatgaagtgtctgtctcagcatcacaactcaaacatttctagtgaagat 408

                                                                       
Query: 364 attttgggagtgtctggaaagtttaggaggaagcagcacactgggagtagattctaatgg 423
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 407 attttgggagtgtctggaaagtttaggagtaagcagcacactgggagtagattctaatgg 348

                                                                       
Query: 424 tatagctgtctagctatttgttctctgcattctgtgtgccatggtgtgaagagctgtgcc 483
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 347 tatagctgtctagctatttgttctctgcattctgtgtgccat-gtgtgaagagctgtgcc 289

                                                                       
Query: 484 ctgccacatctttctgctgcctgcttttcctaggcaaaaacaagacctaaaacctctgaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ctgccacatctttctgctgcctgcttttcctaggcaaaaacaagacctaaaacctctgaa 229

                                   
Query: 544 cctctgcatgtcttttagggggag 567
           ||||||||||||||||||||||||
Sbjct: 228 cctctgcatgtcttttagggggag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space:   533049
Effective search space used:   533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)