Query= MSMg01no428_l10.b1 MSMg01no428_l10.b1 CHROMAT_FILE:
MSMg01no428_l10.b1 PHD_FILE: MSMg01no428_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:58 2005
(237 letters)
>mm_chr18_40896068_40896704
Length = 637
Score = 435 bits (225), Expect = e-126
Identities = 234/237 (98%)
Strand = Plus / Minus
Query: 1 tctttaggcaagagagacctccccagagaatgggctcccccatcccaaaacctagaaact 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tctttagtcaagagagacctccccagagaatgggctcccccatcccaaaacctagaaact 378
Query: 61 agaccttacacaagagcctgttttgaattgcaggaacttaaataatacccgctaaacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agaccttacacaagagcctgttttgaattgcaggaacttaaataatacccgctaaacttc 318
Query: 121 catcccaaatggatcaaagacatcaggaaaggatcaaaatccatgctaattaatcttatt 180
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 317 catcccaaatggatcaaagacatcaggaaaggatcaaattccatgctaattaatcttaat 258
Query: 181 tgaggctaggataatctgcaggattagaatagacttctaaactaatacaatgaagca 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tgaggctaggataatctgcaggattagaatagacttctaaactaatacaatgaagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no428_l10.g1 MSMg01no428_l10.g1 CHROMAT_FILE:
MSMg01no428_l10.g1 PHD_FILE: MSMg01no428_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:58 2005
(512 letters)
>mm_chr18_40714114_40715026
Length = 913
Score = 891 bits (461), Expect = 0.0
Identities = 500/513 (97%), Gaps = 1/513 (0%)
Strand = Plus / Plus
Query: 1 ttaccctgtagtccacaaaactatctggctttctggttgatagaatcccaaggactccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaccctgtagtccacaaaactatctggctttctggttgatagaatcccaaggactccgt 260
Query: 61 gcccagttttt-cttgaaagagcatgctaagtccttaggggaatgaagagcaaccaaatt 119
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcccagttttttcttgaaagagcatgctaagtccttaggggaatgaagagcaaccaaatt 320
Query: 120 gatatttttaaatggggggcgggggcgagccaaaggaagctttgccactaaagcaaagac 179
|||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||
Sbjct: 321 gatatttttaaatggggggcaggggcgagccaaaggaggctttgtcactaaagcaaagac 380
Query: 180 acaaaagttataagttctattaaaaagctttctcacaagttagtgatacaaatcaaggaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaaaagttataagttctattaaaaagctttctcacaagttagtgatacaaatcaaggaa 440
Query: 240 tatatatctccttatgtgatttagtcccctgttaaggattgattggactcacacgtttgc 299
| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 441 cagatatctccttatgtgatttagtcccctgttaaggattgattgaactcaaacgtttgc 500
Query: 300 caatttactgaaaataactgcaagtgtcattacatgactgtccacagagtccaatttcaa 359
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 caatttattgaaaataactgcaagtgtcattacatgcctgtccacagagtccaatttcaa 560
Query: 360 tctgccccatctctgtgcttatggccactctcttcttggatactgcagggagtgcttgtt 419
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctgccccgtctctgtgcttatggccactctcttcttggatactgcagggagtgcttgtt 620
Query: 420 ctcttcaataggtctaacagaagcaggaagataattttgctaaattataggaattctttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctcttcaataggtctaacagaagcaggaagataattttgctaaattataggaattctttt 680
Query: 480 ctctaacttgtctcgatgtctcaatgtcccagt 512
|||||||||||||| ||||||| ||||||||||
Sbjct: 681 ctctaacttgtctcaatgtctccatgtcccagt 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 913
Length adjustment: 10
Effective length of query: 502
Effective length of database: 903
Effective search space: 453306
Effective search space used: 453306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
