Query= MSMg01no428_p04.b1 MSMg01no428_p04.b1 CHROMAT_FILE:
MSMg01no428_p04.b1 PHD_FILE: MSMg01no428_p04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:16 2005
(248 letters)
>mm_chr18_81527014_81527660
Length = 647
Score = 443 bits (229), Expect = e-129
Identities = 243/248 (97%), Gaps = 1/248 (0%)
Strand = Plus / Plus
Query: 1 tccttctgngatgtccctcgctattatgaaatagggtctgagaagacaacggtgaatccc 60
|||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||
Sbjct: 201 tccttctgtgatgtccctcgctattatggaatagggcctgagaagacaacggtgaacccc 260
Query: 61 gctttggctcgtatgaggcatcatggtacagagtggaggtagtcacagggagtaagaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctttggctcgtatgaggcatcatggtacagagtggaggtagtcacagggagtaagaaaa 320
Query: 121 cgtaggcaggtcatgctgagttgtggagggtgctcagatctccatgggtgtccagtcatt 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 cgtaggcaggtcatgctgagttgtggagggtgctcagatctccatgg-tgtccagtcatt 379
Query: 181 ttagggtagaactccagggtcctcctgtgtgaccaaatctttgtttctttacttcagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttagggtagaactccagggtcctcctgtgtgaccaaatctttgtttctttacttcagaag 439
Query: 241 caaattct 248
||||||||
Sbjct: 440 caaattct 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 647
Length adjustment: 9
Effective length of query: 239
Effective length of database: 638
Effective search space: 152482
Effective search space used: 152482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no428_p04.g1 MSMg01no428_p04.g1 CHROMAT_FILE:
MSMg01no428_p04.g1 PHD_FILE: MSMg01no428_p04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:16 2005
(209 letters)
>mm_chr18_81761570_81762178
Length = 609
Score = 391 bits (202), Expect = e-113
Identities = 205/206 (99%)
Strand = Plus / Minus
Query: 1 tgagtatcgtgagcataacaagagccatttcttcaagtgggagcaggagttgcagagtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgagtatcgtgagcataacaagagccatttcttcaagtgggagcaggagttgcagagtgt 273
Query: 61 agcttaaagccacataggagaggctgtgtctatagtagttccatacctagacatagtaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agcttaaagccacataggagaggctgtgtctatagtagttccatacctagacatagtaac 213
Query: 121 caactcagatccaggaacagggagaggaggaaaggaagaaaaaggaagaagagtaaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 212 caactcagatccaggaacagggagaggaggaaaggaagaaaaaggaagaagagtaagaaa 153
Query: 181 gaggaggagaggtggtgaggaggagg 206
||||||||||||||||||||||||||
Sbjct: 152 gaggaggagaggtggtgaggaggagg 127
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 609
Length adjustment: 9
Effective length of query: 200
Effective length of database: 600
Effective search space: 120000
Effective search space used: 120000
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
