Query= MSMg01no430_d19.b1 MSMg01no430_d19.b1 CHROMAT_FILE:
MSMg01no430_d19.b1 PHD_FILE: MSMg01no430_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:59 2005
(363 letters)
>mm_chr18_63026651_63027413
Length = 763
Score = 644 bits (333), Expect = 0.0
Identities = 360/379 (94%), Gaps = 16/379 (4%)
Strand = Plus / Plus
Query: 1 ataattaaccttaaagctaaaggccatttgctttgtgcattggtcctcaggtgacatctg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ataattaacctcaaagctaaaggccatttgctttgtgcattggtcctcaggtgacatctg 244
Query: 61 aatgccttggtcttcttagcacacacttattcatacacaggaagataatcactgcatcct 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aatgccttggtcttcatagcacacacttattcatacacaggaagataatcactgcatcct 304
Query: 121 ttgaaagtctctctgactactaaaatgg----------------ttttctctctaggcta 164
|||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 305 ttgaaagtctctctgactactaaaatggcctatgatcttcaaggttttctctctaggcta 364
Query: 165 tggggatcatagatatcaaagcaggtgagttcagggctctgggaatgtctctctggctgg 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tggggatcatagatatcaaagcaggtgagttcagggctctgggaatgtctctctggctgg 424
Query: 225 agcaccattggaaagatttgaccctgttcagacatgcaacaatgtatacttatccaccca 284
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 425 agcaccattggaaagatttgaccctgtccagacatgcaacaatgtatacttatccaccca 484
Query: 285 gagaatcgggccagcatagctctaaacagcaacttccttagcaagaatttaccctgggct 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gagaatcgggccagcatagctctaaacagcaacttccttagcaagaatttaccctgggct 544
Query: 345 ttgggatgtgtcttaggat 363
|||||||||||||||||||
Sbjct: 545 ttgggatgtgtcttaggat 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_d19.g1 MSMg01no430_d19.g1 CHROMAT_FILE:
MSMg01no430_d19.g1 PHD_FILE: MSMg01no430_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:59 2005
(395 letters)
>mm_chr18_63202565_63203357
Length = 793
Score = 721 bits (373), Expect = 0.0
Identities = 389/395 (98%), Gaps = 2/395 (0%)
Strand = Plus / Minus
Query: 1 agtgggaaagagatgctaataccaataagtaagagacagcagaagagagaaagaggagga 60
|||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 593 agtgggaa--agatgctaataccaataagaaagagacagcagaagagagaaagaggagga 536
Query: 61 gatccacattaaagaagaggcgttttttaaagcatgtgcttgttacgttcagccagaatc 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 535 gatccacattaaagaagaggcgttttttaaagcatgtgcttgttatgttcagccagaatc 476
Query: 121 tactggcttctgtcatcctcagtggtcctgcgcagctaaatcccttgtgcaggactggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tactggcttctgtcatcctcagtggtcctgcgcagctaaatcccttgtgcaggactggga 416
Query: 181 atggaccacatcttggtcaaaagcctctgggactatcaggcatggcttctcctttccata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 atggaccacatcttggtcaaaagcctctgggactatcaggcatggcttctcctttccata 356
Query: 241 tgctctccgatgtaaggagtgacggcggtaggtatgctgtgctacatgtctgctgacttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tgctctccgatgtaaggagtgacggcggtaggtatgctgtgctacatgtctgctgacttg 296
Query: 301 gaaatgaaccgagagctcatggctgtgactattgatcctgtttttaaaacactcctgtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gaaatgaaccgagagctcatggctgtgactattgatcctgtttttaaaacactcctgtgc 236
Query: 361 atagaccgggttactccttctcgaggcgagagtca 395
|||||| ||||| ||||||||||||||||||||||
Sbjct: 235 atagactgggttgctccttctcgaggcgagagtca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 793
Length adjustment: 9
Effective length of query: 386
Effective length of database: 784
Effective search space: 302624
Effective search space used: 302624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
