Query= MSMg01no432_e13.b1 MSMg01no432_e13.b1 CHROMAT_FILE:
MSMg01no432_e13.b1 PHD_FILE: MSMg01no432_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:57 2005
(464 letters)
>mm_chr18_81602264_81603127
Length = 864
Score = 526 bits (272), Expect = e-153
Identities = 371/456 (81%), Gaps = 79/456 (17%)
Strand = Plus / Plus
Query: 9 agaccctgtctgaaaaccgaacatcacagcttaaaccaaaggaacaggcaagatgaaagg 68
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 209 agaccctgtctgaaaactgaacatcacagcttaaaccaaaggaacaagcaagatgaaagg 268
Query: 69 ctcctgaggcgtgacacttgggtttggcctctgacctctacacagcttgtatacatgcat 128
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 269 ctcctgaggcgtgacacttgggtttgacctctgacctctacacagcttgtatacatgcat 328
Query: 129 acatgcacctgcacacacatgaccaatccagacatgtttgcatattcaggtatcaaataa 188
|||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acatgcacctgcacacacatgaccaatccagacatgttt--------------------- 367
Query: 189 tctgtgtgtctataagcattttttggcatatgatgctttatatcaatgaagatgtgttct 248
||
Sbjct: 368 ----------------------------------------------------------ct 369
Query: 249 aaactcctcaaaaagaaaatctaactcaaaagtttttctaaaaaggaatagactggagag 308
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 370 aaactcctcaaaaagaaaatctaactgaaaagtttttctaaaaaggaatagactggagag 429
Query: 309 ctggctcatgggctaagaacagctttctattctcgtagaggtcctgagttccacagcagt 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ctggctcatgggctaagaacagctttctattctcgtagaggtcctgagttccacagcagt 489
Query: 369 ttgtaacgtcagttccaggccctctgatgccttcttctggaccgcacaggcaccaggcgt 428
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 490 ttgtaacgtcagttccaggccctctgatgccttcttcaggaccgcacaggcaccaggcat 549
Query: 429 atagatagtacacataaacacatgtatatatacttt 464
||||||||||||||||||||||||||||||||||||
Sbjct: 550 atagatagtacacataaacacatgtatatatacttt 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_e13.g1 MSMg01no432_e13.g1 CHROMAT_FILE:
MSMg01no432_e13.g1 PHD_FILE: MSMg01no432_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:57 2005
(288 letters)
>mm_chr18_81746338_81747025
Length = 688
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%)
Strand = Plus / Minus
Query: 1 ttgaatcgtctgtatttttctacctctggtactgtcttatatgccggtttcaaatgaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttgaatcgtctgtatttttctacctctggtactgtcttatatgccggtttcaaatgaact 370
Query: 61 cggtgatggccggagttagttgtgggtgtcatggcatgcagttctgtaggtgctaagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cggtgatggccggagttagttgtgggtgtcatggcatgcagttctgtaggtgctaagatg 310
Query: 121 gcagatgctctgagtgataagaacaggaggctgttaaacaaatggacatccagccttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 309 gcagatgctctgagtgataagaacaggaggctgttaaacaaatggacatccagccttctt 250
Query: 181 ctgcctgcaaccaacaaggtggtggtggggatatatttcccatctttacttataaatata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ctgcctgcaaccaacaaggtggtggtggggatatatttcccatctttacttataaatata 190
Query: 241 ttatttcttttttatttgggagggggaagtaagacaggacctagggta 288
||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttatttcgtttttatttgggagggggaagtaagacaggacctagggta 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
