Query= MSMg01no432_f22.b1 MSMg01no432_f22.b1 CHROMAT_FILE:
MSMg01no432_f22.b1 PHD_FILE: MSMg01no432_f22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:04 2005
(394 letters)
>mm_chr18_5157415_5158204
Length = 790
Score = 735 bits (380), Expect = 0.0
Identities = 389/394 (98%), Gaps = 4/394 (1%)
Strand = Plus / Plus
Query: 1 agacagtttaagcagaagtttagttagtaagctaagcgaagcgctccaacaagaggctag 60
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 agacagtttaagcagaagtttagt----aagctaagcgaagcgctccaacaagaggctag 256
Query: 61 cccaaggtgatggacagcatgtcgggttctatgttgttgattttaaagaaaattctatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cccaaggtgatggacagcatgtcgggttctatgttgttgattttaaagaaaattctatga 316
Query: 121 atacctatgaggtgggtagcatattcatggagtagtaaaattacctattttctgtcctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atacctatgaggtgggtagcatattcatggagtagtaaaattacctattttctgtcctga 376
Query: 181 atcatggcagaccagatctttcctctggagaatttcctttcaggaaccacaaaagggtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atcatggcagaccagatctttcctctggagaatttcctttcaggaaccacaaaagggtag 436
Query: 241 gtatatcaaaactaatactataatcatgccaagtctttgaggatacagagtctacttact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gtatatcaaaactaatactataatcatgccaagtctttgaggatacagagtctacttact 496
Query: 301 tcgtgtgtgggtaaatatgtctagctgcaaagaggcatccacacaaccatctggaggcac 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tcatgtgtgggtaaatatgtctagctgcaaagaggcatccacacaaccatctggaggcac 556
Query: 361 aactatcaaggtatacctgtagttaccttggtta 394
||||||||||||||||||||||||||||||||||
Sbjct: 557 aactatcaaggtatacctgtagttaccttggtta 590
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 790
Length adjustment: 9
Effective length of query: 385
Effective length of database: 781
Effective search space: 300685
Effective search space used: 300685
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_f22.g1 MSMg01no432_f22.g1 CHROMAT_FILE:
MSMg01no432_f22.g1 PHD_FILE: MSMg01no432_f22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:04 2005
(410 letters)
>mm_chr18_5354368_5355177
Length = 810
Score = 793 bits (410), Expect = 0.0
Identities = 410/410 (100%)
Strand = Plus / Minus
Query: 1 catgtttctggaacatgattaaatgcacattcttattgatttttcccttctcatttgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 catgtttctggaacatgattaaatgcacattcttattgatttttcccttctcatttgttc 551
Query: 61 agtagaattttgaaagggcttcaaagatactggttttagttgcagccttgaaggcttgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 agtagaattttgaaagggcttcaaagatactggttttagttgcagccttgaaggcttgag 491
Query: 121 aaaacagctgtttctttcacttcacctttaaccacaagtcatgcacaaacacaggggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aaaacagctgtttctttcacttcacctttaaccacaagtcatgcacaaacacaggggcag 431
Query: 181 caataagttcttagaggcagtcatactgaatggaagcagttgtactaaaaagtagaacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 caataagttcttagaggcagtcatactgaatggaagcagttgtactaaaaagtagaacac 371
Query: 241 tttgatctctggaaaaacttagtgtgataacatctgataagacattctaacggctgacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tttgatctctggaaaaacttagtgtgataacatctgataagacattctaacggctgacca 311
Query: 301 taagatccaagagagagcaggtctggattagcttctgagtggcctctcagataaatcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 taagatccaagagagagcaggtctggattagcttctgagtggcctctcagataaatcttt 251
Query: 361 ggcagcaaactgagggcacagcttcctcagaagtccctggggttgtaaag 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ggcagcaaactgagggcacagcttcctcagaagtccctggggttgtaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
