Query= MSMg01no433_a12.b1 MSMg01no433_a12.b1 CHROMAT_FILE:
MSMg01no433_a12.b1 PHD_FILE: MSMg01no433_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:00 2005
(179 letters)
>mm_chr18_81184903_81185485
Length = 583
Score = 335 bits (173), Expect = 1e-96
Identities = 179/183 (97%), Gaps = 4/183 (2%)
Strand = Plus / Plus
Query: 1 cacgaagcaacagctttaggctccgggaagagcgcaagagaact----gtgcggaggaag 56
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 cacgaagcaacagctttaggctccgggaagagcgcaagagaactaactgtgcggaggaag 260
Query: 57 gacgcgcacaggttggagacgcctccaaacagccccaagagccacttacgaaaaaaaaaa 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacgcgcacaggttggagacgcctccaaacagccccaagagccacttacgaaaaaaaaaa 320
Query: 117 aatccttaaggttggtttgtttttccttttggtggagggtgtacttatttaagtggaaaa 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatccttaaggttggtttgtttttccttttggtggagggtgtacttatttaagtggaaaa 380
Query: 177 aaa 179
|||
Sbjct: 381 aaa 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 583
Length adjustment: 8
Effective length of query: 171
Effective length of database: 575
Effective search space: 98325
Effective search space used: 98325
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_a12.g1 MSMg01no433_a12.g1 CHROMAT_FILE:
MSMg01no433_a12.g1 PHD_FILE: MSMg01no433_a12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:00 2005
(251 letters)
>mm_chr18_81315017_81315667
Length = 651
Score = 329 bits (170), Expect = 1e-94
Identities = 235/270 (87%), Gaps = 24/270 (8%)
Strand = Plus / Minus
Query: 1 tacacagcagatcctgtcctcatccttgccatctcagacatgacccacaatttgtcccaa 60
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 361 tacacagcagatcgtgtcctcatccctgccatctcagacatgacccacaatttgtcccaa 302
Query: 61 agcagttttaaatttttaataaaatgcaattgcatctctccctctcttccccccaacccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcagttttaaatttttaataaaatgcaattgcatctctccctctcttccccccaacccc 242
Query: 121 ctccatctcacacccgttgcttgcctctctctctctctctc------------------c 162
||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 241 ctccatctcacactcgttgcttgcctctctctctctctctctctctctctctctctctcc 182
Query: 163 atatgtatatatacatatatatatatatgtatacacacac--acacacaaacacacacac 220
|||||||||||||||||||||||||| ||||| | | | | | ||| |||||||||
Sbjct: 181 atatgtatatatacatatatatatat--gtatatatatatgtatataca--cacacacac 126
Query: 221 atatatatatacacatatatgtgtgtgtgt 250
||||||||| ||| ||||||||||||||||
Sbjct: 125 atatatatacacatatatatgtgtgtgtgt 96
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
